Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1015 ATGTGGACTCATCAACTGCTACAACCACTGCCGCCCCACAATCTCTTCTTCAACTCTTATTCACCTTCAAATCTTACAAAATTTCCATCTTTTGTAAAATTGAATTCGACCCATAACACAAAAAATCACAATGGAACTGTGAACTCAACAAAAATAACTTTGGAAGAGCTTCCTCCAAACGCGCTTCAAATGGAGAAAGAAGCAGACTGGATATGTGGGTTCTCCCTTGGTATCGACTTGGGAATGGCTCGTACTGGTCTTGCTCTCAGCAAAGGCTTCTCTGTTCGCCCTTTAACAGTTTTGGAACTTCGAGGACAAAAACTTGAACTCCGGATTATGAACATTGCCGAACAAGAGGAAGCTGATGAGTTTATAATTGGACTTCCAAAATCTTCTGATGGAAAGGAAACAACACAGTCAAAAATAATCCGTAGTATTGCCGGAAGGCTTGCTGTTCGAGCTGCTGAGAGGGGTTGGAGAGTATATCTACAGGATGAATATGGGACGACAACAACCGCCATGGATCGAATGATCGACATGGGCTTGAGTAAGTCTGCAAGGCAGAACAAACTTGATGCCTATGCTGCCACGATGCTACTTGAGAGATATTTCTCCACATCAGGTCAGAAAACTGAACTTGTTGTGCCCAAGAATCTTGAACTACAAGGAAAACTTAGAAAGGGTCCTCCCAAAGATGAAGATTTTTTCTCTGATGATGATGATTTTTTCCCTGATGAAGATTAA 744 0.4194 MWTHQLLQPLPPHNLFFNSYSPSNLTKFPSFVKLNSTHNTKNHNGTVNSTKITLEELPPNALQMEKEADWICGFSLGIDLGMARTGLALSKGFSVRPLTVLELRGQKLELRIMNIAEQEEADEFIIGLPKSSDGKETTQSKIIRSIAGRLAVRAAERGWRVYLQDEYGTTTTAMDRMIDMGLSKSARQNKLDAYAATMLLERYFSTSGQKTELVVPKNLELQGKLRKGPPKDEDFFSDDDDFFPDED* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1015 247 Hamap Putative pre-16S rRNA nuclease [yqgF]. 73 208 IPR005227 GO:0006364
Tpr4g1015 247 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 18 239 IPR005227 GO:0006364
Tpr4g1015 247 MobiDBLite consensus disorder prediction 222 247 - -
Tpr4g1015 247 Gene3D - 75 213 IPR037027 GO:0006139
Tpr4g1015 247 SUPERFAMILY Ribonuclease H-like 74 206 IPR012337 -
Tpr4g1015 247 CDD YqgF 76 204 IPR005227 GO:0006364
Tpr4g1015 247 Pfam Holliday junction resolvase 75 205 IPR005227 GO:0006364
Tpr4g1015 247 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 18 239 - -
Tpr4g1015 247 SMART rnase_8s 73 173 IPR006641 GO:0006139
Tpr4g1015 247 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 76 204 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1015 - - lja:Lj3g3v1440180.1 324.709