Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1014 ATGGCTCACCGTCAACTTATGGACTCACTCACTTCTCACATCTCCCTTTACCATTCCCAATCCCCAAACCCTAACCCTAACCCTAACCCTAACCCTAGATCCTCCATTCTCAAATGGTTCTCTTCTCTCTCAATTCACCATCGTCTCTCTCATCTCACAATCCTCGATTCCAATTTCGTCCAAATCCTCCTTCAAATGCTGTCTAAGCTCCAATCCAACAATAACCACGGTTGTTTCATCCTCCTCCCCGATCTTCCCTCTCGCGATCCGCCGTTCTTACCGACTCTCTGCTTCAAGAAATCACATGGTCTCATTGCTCGAATTGCGGATTCGGACACTGCTGGAAAATTTATCTTTGATTCGGTTCGGGTTTTTGCTTCCCGGGAAGGGGAGGATGCCGCGAAATGTTCGTGTGATGCTAGGTGTCTTGACACGGTGACATTTTGTGAAGGGATTGTGGAGGATGTGGATAGATTTGTGGAGGTGATGGATAAGATTTCTGGTGGTGGGTTTCTTAGAGGGGAAGAAAATGAGATTGGTGAGGATTGGGTTGAATTGAATTGGTTGAAATCGAAAGGGTATTATGGGATTGAGGCTTTTATTGCGAATAGGGTTGAGGTTTCGATTAGGTTGGCTTGGTTGAATAGTTGTGGTGGGAAGAAAAGAGGTGTGAAATTGAAGGAGAAGTTGAATGTAGCTGGTGTTGCTGCTAATGTGTATTGGAGGAAGAAGGGTTGTGTTGATTGGTGGGGGAATTTGGATTCGGTTACAAGGAAGAAGGTGTTCAACACGATTATCATGAAATCGGCTAAATCTTTGACGTACGAGGTTTTGAAAGTGGCAAGCAGTGCTTCCGAAGATGAGGTTTGGCTATACAGTAGGGGAGTGGGAGTTGATAAACTACTTGACTATAATTGTACTGGATCTGCTCAAAGGACCACCCGAGCATTTTGCGATGATACAGAGTTTGGCAGAATTATTACACCTGTTGTTTGTAAAAAGCCTGCAGCTTTAGCTAGAGCCTTTAATTCCCTATCCGTGCTTCATGACATTAACATAATGTTGACATCAAGTATTAATAGTGAATATGATATAGGAACTCTTTTCTTTAGTTCGTTGGTTTCTGTCTCTACAATATCTGATTGTATATTAAGAAAATTGAGAGGTTTTCTGATGGTTATTTCACTTGACTGCACAAAACATGAGCTACTAGAGGAGGAACATGACAAATCCTCATCGGGTAAACCTAAGGAAAAACTTGGTCCTTCTAACCGTAAAAAGAAGGGACGGACCCGCAATAATAAAAGGCAAAATCCTGCCCCAAAGACACCTGTGAGCGGTATTTCATGCGAAAATCTTCATAAGGACATTGATTGTGTATTGGAAGATAAAAAGAAGACTGATTTAACAAAACCCAGGGAACTTCCTCAAGTTCCTCTGGGAAAAAACAATATTTCTATGGGGAGCTCCTCACCACCTGTAAAAATTGTAGATTATACTCGAGAATCGAATGTTGGCAAACCTCGAACCACTCCAAGAAAAAGTAGAAAAGAGAAAAATAAAAATAAAAATAAAAGCATCCTTGTTGACGGTACAGTTGTAGATTCTCACAAGTCAGTTACGCATGCTGCCTCTACCACTGTTATTTCTAATGGTGAGGTGGAAATATGCGATAGGTCTTTTGATAGTTCTACCATTCAGAATGTCAAATGCAAAGATTCTATTGGTAATGACATCCTTGTCTCAAATTCAAGCCCTTGTTCTCTTAATGGACCTGCTAAGGAGAACAACTCTACCGGGAAAGTTGAAGGAAAGAACATTGATGATCTTCCTGATAGTTGCAATAGTTCAGGTCCTCAGTTTTGTTTATTGCCAAATGAAAGGAAAATGTTGCCTTGTGAATTAGATACTCGTGTTGTAGAATGTAAAGCTATAACACAACCTGTTCCTGCATTGAAGCACAATAATTTCTCCAGCAATGAAGATACATGTTCTTTGAACACAACAGGTGCTGCCAAAGCTGATGTGAAGCCAACTATTTATGACAAACCAATTAGAGAGGCTAATGTAAAAGAATTTGGCATGTTGAAGGAGAGAGATAGATGTCTATTTGAAAGTAGAAATTCTGCTTTCTCAAAATGCAGTCCGTATGAATGGCCTGGTATACCTTCTATCTATTTTCCATCTTTTAACTCGCATCTCCCTCCTGCAACAGATAGATTGCATCTGGATGTTGGACGCAATTGGCATAATCACTTCTGCCACCCATTTGTCCCCACATTACCGCAAGCAAGAAATACACCAATTGAAGGTAGATGTAACCAAATTATGTCTCGTCAAATTCCTATGAGTTTTGACTGGCCCCCAGTTTTTCGTGGTGGCGTGACCCCATCACCAAATTGTAAATATGACTCCGGGTTTATGTCTAGGAGACAATGTAAATTTTCAAAAGGGTTGGCTGTTCATAGCATGCATCTTGATGTAACAACTTCTGATGATGAAAGGAAGTACTCTGGGGATACATTGGATTTACCTGACCTGATAAATACACAGTTCACAGATGAATATGACAACCTCTATGTATCAGAGGAAGAGTATGATTTCCATGCTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGCGGTGTAATGTACTGGAACCCTTCCGAACATTCAGGAAAAGGTTTTTCTCGGCCTCCCTCTCTCAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATCAGACAGTGGATGATATGGTTGCTTTCTCTTCTTCGTATAGTACAAATGGTTTAGCATCACCAACTACTGCGACATTTTGCTCTCCCTTTGATCCTGTAGGGACTGGGCCCCCGACTGTTGGTTATGTAATGTCTGGTAATGATGTACCTGGGAAAGTGATGCATTCTTCGTCAGTTACTGATGCTGCAGTGGATGATGATACTTCTGGTTCTTTAGGTAATAACTTACCTGGAGAAATTGAAGGGAAGGCTGGTGATTCGCATCCATATCCCATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTCTATATGTGTTGATCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCACCATCACCTGTGGTGCTTTGTGTACCACGTGCACCACGTCCTCCCCCACCCTCCCCTGTGAGTGACTCTAGGAAACAAAGGGGTTTTCCGACTGTTAGGTCTGGTAGTTCCAGCCCAAGACACTGGGGAATGAGAGGTTGGTATCATGATGGAAGTAATTTAGAGGATACTTGTTTGAGAATGGATGGTGCTGAAGTTGTGTGGCCTTCTTGGAGAAGTAAAAACCTTGCAGTGCAACCTCTGATCCAACCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCAATGTCACAGATAGCACGCGACCAGGAACATCCGGATGTCACCTTACCTCTGCAACCTCCCGAGTTACGAAGCTCTTCTGCAACGAGTGCATCTTTATCTTCAATGCATGGAATGCTCCATGACGAGATTGACTCTTTCTGTAAACAGGTTGCGGCCGAAAACATGGCAAGGAGGCCTTACATTAATTGGGCTTTCAAGAGAGTTACCCGATCTCTGCAGGTTTTATGGCCCAGATCCAGGACAAATATATTTGGTTCCAATGCCACTGGTATGGCTCTTCCAACAAGTGATGTTGACCTTGTGGTTTCTCTCCCTCCAGTGAGGAATCTGGAACCCATTAAAGAAGCTGGAATATTGGAAGGTCGTAATGGTATTAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGAATGGGTAAAAAATGATTCTCTGAAGACAGTGGAAAATACTGCTATACCTATTATTATGCTCGTGGTGGAAGTACCCGAGGATGTTATCACTTCATCAGCTCCTACGTTACATTCATTAAAAGAAAAGTCACATTGTACAACTGGTGAACATGGTAATGACAATCATTCTGATATGATCCAGCTAGAAGATTCAGCTTTGCTGAAAAGCTCTCAAACTAATATTTATGCTTTGAAAGATTCCAAATCAGTTCGGGTTGACATCAGCTTTAAGTCCCCATCACATACAGGACTCCAAACTACAGGAATGGTTAAGGAGTTAACAGAACAATTTCCTGCTGCAACTCCTCTTGCTTTGGTGCTAAAACAGTTTTTGGCAGATCGGAGCCTTGACCAGTCCTACTCCGGTGGCTTAAGTTCCTACTGTTTGGTATTATTAATTATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGGCCAATCAACCAAGTTATAAATTTAATGAACCAAGTAAAAAGGAACAAGAATCGAGATTTTGCTGTTTTTTTAATCAATGACGAGTTGGCTGAAAATGACCTTAGCTGGGTTTTGGAGTGTAGTTCTTACTTTCTCGGTTCATTTTTATTTTTAGATAAACTACTGCCCCTAAATGAATTCTCTTCCATTTTCTTGCAGAATTATGGAAGTCTTCTGGTGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGTCAAATGCGGATATCGGTGCAGGGAAGTGGACTTTATATAAAGAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATCGATGATCCTCTTTTTCCAACTAATAATGTGGGAAGGAATTGCTTCCGAATACATCAATGTATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAAAATGAACTCACATTCCTAAATGGTGATGGTGAGTCGTGCTCAAGGCCATCTTACAGACTACTTCCAAAAATTATCCCAAGTCTTGATGTATCATAA 4854 0.4164 MAHRQLMDSLTSHISLYHSQSPNPNPNPNPNPRSSILKWFSSLSIHHRLSHLTILDSNFVQILLQMLSKLQSNNNHGCFILLPDLPSRDPPFLPTLCFKKSHGLIARIADSDTAGKFIFDSVRVFASREGEDAAKCSCDARCLDTVTFCEGIVEDVDRFVEVMDKISGGGFLRGEENEIGEDWVELNWLKSKGYYGIEAFIANRVEVSIRLAWLNSCGGKKRGVKLKEKLNVAGVAANVYWRKKGCVDWWGNLDSVTRKKVFNTIIMKSAKSLTYEVLKVASSASEDEVWLYSRGVGVDKLLDYNCTGSAQRTTRAFCDDTEFGRIITPVVCKKPAALARAFNSLSVLHDINIMLTSSINSEYDIGTLFFSSLVSVSTISDCILRKLRGFLMVISLDCTKHELLEEEHDKSSSGKPKEKLGPSNRKKKGRTRNNKRQNPAPKTPVSGISCENLHKDIDCVLEDKKKTDLTKPRELPQVPLGKNNISMGSSSPPVKIVDYTRESNVGKPRTTPRKSRKEKNKNKNKSILVDGTVVDSHKSVTHAASTTVISNGEVEICDRSFDSSTIQNVKCKDSIGNDILVSNSSPCSLNGPAKENNSTGKVEGKNIDDLPDSCNSSGPQFCLLPNERKMLPCELDTRVVECKAITQPVPALKHNNFSSNEDTCSLNTTGAAKADVKPTIYDKPIREANVKEFGMLKERDRCLFESRNSAFSKCSPYEWPGIPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLPQARNTPIEGRCNQIMSRQIPMSFDWPPVFRGGVTPSPNCKYDSGFMSRRQCKFSKGLAVHSMHLDVTTSDDERKYSGDTLDLPDLINTQFTDEYDNLYVSEEEYDFHAVSGIDYNQYFGGGVMYWNPSEHSGKGFSRPPSLSSDDSLWALREADMNQTVDDMVAFSSSYSTNGLASPTTATFCSPFDPVGTGPPTVGYVMSGNDVPGKVMHSSSVTDAAVDDDTSGSLGNNLPGEIEGKAGDSHPYPILRPIIIPNLSRERSICVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSNLEDTCLRMDGAEVVWPSWRSKNLAVQPLIQPLPAALLQDRLIAMSQIARDQEHPDVTLPLQPPELRSSSATSASLSSMHGMLHDEIDSFCKQVAAENMARRPYINWAFKRVTRSLQVLWPRSRTNIFGSNATGMALPTSDVDLVVSLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQEWVKNDSLKTVENTAIPIIMLVVEVPEDVITSSAPTLHSLKEKSHCTTGEHGNDNHSDMIQLEDSALLKSSQTNIYALKDSKSVRVDISFKSPSHTGLQTTGMVKELTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQVINLMNQVKRNKNRDFAVFLINDELAENDLSWVLECSSYFLGSFLFLDKLLPLNEFSSIFLQNYGSLLVDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELTFLNGDGESCSRPSYRLLPKIIPSLDVS* 1618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1014 1617 PANTHER POLY(A) RNA POLYMERASE 677 1613 IPR045862 GO:0004652|GO:0031499|GO:0043631
Tpr4g1014 1617 SUPERFAMILY Nucleotidyltransferase 1184 1390 IPR043519 -
Tpr4g1014 1617 SUPERFAMILY PAP/OAS1 substrate-binding domain 1395 1590 - -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 405 448 - -
Tpr4g1014 1617 Pfam Nucleotidyltransferase domain 1209 1252 IPR002934 GO:0016779
Tpr4g1014 1617 Gene3D - 1177 1194 - -
Tpr4g1014 1617 Gene3D - 1352 1611 - -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 482 497 - -
Tpr4g1014 1617 Gene3D Beta Polymerase, domain 2 1195 1305 IPR043519 -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 421 435 - -
Tpr4g1014 1617 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 677 1613 - -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 1056 1084 - -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 405 420 - -
Tpr4g1014 1617 MobiDBLite consensus disorder prediction 470 525 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1014 - - mtr:MTR_4g027425 2377.05