Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g1007 ATGCCGAAACGCACCAAATCGGAAGAAGAGGGTACTTCAACATCATCAGAATCGGAATCGGAATCAGAACAAACCGTACGGAACGGAAGTACCATGTCAGAGTACGAGAAACAGAGACTGCAAAGAATTGCGGAAAACCAAGCGAGATTGAAAGCTATGGGGTTACCCCAAATGGTCACTTCATTGAAAAATTCAACTCCGATTAAGAAGAAGAAAGGGAAAGAAAAGGTTCAAGATGATGATGAAGAGTATATACCCGAAAACGAAGAAGAACGAGAACCCGAATCAGATTCAGATTCTTCTAGTGAAGAACAACATGAACATGATTCTGACTATGAAAATCCTTCTGGGTCACGGAAAAGAAAGGCAAAGAACAAAAGTTTGAAGGTGAAAAGTAGAGTAACTGGAAAGAAGCATAGTGGTAATTTAGATTATATTGATAATGAAGACGAAGCTTTGATGCAGGCAATTGCTCTTTCCTTGCAAGATTCTGCCGAAGCTTCATTTTTCTCTAACAAGAATGTAGGGAACATCAGCAAGGCTGAGAAAAATGAAAACGCTCAGGTTCAAGAAGATAAGGGAAGAAAGAAGAACAAAAAATCGTTTACTAGTCGGCTGCAAATGACTGAGGATGAACTCATTGTACACTTCTTCCAACTTGATGAAGCAGGAAAAGGAACTGTAACAAAAAGGGATTTAGAAAGAGCAGCTATAGCTCATGATTTTGCATGGACAGACAAAGAGTTGCTTGATATGATTCGTTGCTTTGATAGTGATAGAGATGGAAAGCTAAGCCTTGATGATTTTCGGAAGATTGTTGTTCGTTGCAACATGATAAAAGTCTCAGAAAATTCTTGA 858 0.3893 MPKRTKSEEEGTSTSSESESESEQTVRNGSTMSEYEKQRLQRIAENQARLKAMGLPQMVTSLKNSTPIKKKKGKEKVQDDDEEYIPENEEEREPESDSDSSSEEQHEHDSDYENPSGSRKRKAKNKSLKVKSRVTGKKHSGNLDYIDNEDEALMQAIALSLQDSAEASFFSNKNVGNISKAEKNENAQVQEDKGRKKNKKSFTSRLQMTEDELIVHFFQLDEAGKGTVTKRDLERAAIAHDFAWTDKELLDMIRCFDSDRDGKLSLDDFRKIVVRCNMIKVSENS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g1007 285 MobiDBLite consensus disorder prediction 185 201 - -
Tpr4g1007 285 ProSiteProfiles EF-hand calcium-binding domain profile. 244 279 IPR002048 GO:0005509
Tpr4g1007 285 MobiDBLite consensus disorder prediction 1 143 - -
Tpr4g1007 285 ProSitePatterns EF-hand calcium-binding domain. 257 269 IPR018247 -
Tpr4g1007 285 SUPERFAMILY EF-hand 198 275 IPR011992 -
Tpr4g1007 285 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 148 167 IPR003903 -
Tpr4g1007 285 MobiDBLite consensus disorder prediction 121 136 - -
Tpr4g1007 285 MobiDBLite consensus disorder prediction 99 120 - -
Tpr4g1007 285 MobiDBLite consensus disorder prediction 181 201 - -
Tpr4g1007 285 Gene3D - 162 284 - -
Tpr4g1007 285 MobiDBLite consensus disorder prediction 82 98 - -
Tpr4g1007 285 SMART efh_1 248 276 IPR002048 GO:0005509
Tpr4g1007 285 CDD EFh 220 273 IPR002048 GO:0005509
Tpr4g1007 285 Pfam EF-hand domain pair 212 273 IPR002048 GO:0005509
Tpr4g1007 285 MobiDBLite consensus disorder prediction 17 37 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g1007 31 282 EF-hand Containing Proteins AT1G73440 39.921 8.04e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g1007 - - gmx:100806103 302.753