Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0979 ATGATGTTATCCGCTTGTATGATAAGTGCCCAAGTTATATCTCTTGATTATATCAGTTCAAGACTCTCCGAAGTTGGTCTCGCTACATTCTTTTACAAAACCGCATTCGGCCAGAAGCAATGCTCTCCGTGTTTCTCCTTTCATTTTGCTCATCCTTGTTTAATGGTCCATTTCAAGAGGAAGACTCCGGTTAGAAGCAGCATAAACGACAGCAGTTTTAGTCCTTCAAATGGAACTAACGGAAGGACGCGCATAATTAGAGTTATTCAAGAGTTTCGGACTAAGTTAGGTTCTAAAATTGAGAAGGTAAGGAAAAATCTTCCAATGAAGCTTCTTTTCTTCTTGGTTGGATTTTATTGTGCAACCGCCTTTTCCACTGTTATCGGACAAACCGGTGATTGGGATATTCTATGTGCGGCCTTAGCTGTTTTTGTTGTGGAAGGCATTGGTGCTCTCATGTATAGTTCTTCTCTTCCTTTAGTTACCAAGAGCCTGATATCAGTGTTTAATTATTGGAAAGCTGGCCTTACATTGGGACTTTTCTTGGATTCATTCAAATATTAG 564 0.3972 MMLSACMISAQVISLDYISSRLSEVGLATFFYKTAFGQKQCSPCFSFHFAHPCLMVHFKRKTPVRSSINDSSFSPSNGTNGRTRIIRVIQEFRTKLGSKIEKVRKNLPMKLLFFLVGFYCATAFSTVIGQTGDWDILCAALAVFVVEGIGALMYSSSLPLVTKSLISVFNYWKAGLTLGLFLDSFKY* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0979 187 PANTHER - 5 187 IPR007572 -
Tpr4g0979 187 Pfam Protein of unknown function (DUF565) 130 186 IPR007572 -
Tpr4g0979 187 PANTHER YCF20-LIKE PROTEIN 5 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0979 Tpr-Chr4 9383002 9387324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0979 - - lja:Lj0g3v0008779.2 284.648