Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0973 ATGCTACTTTTTCTCTCTACAACGGCGATTCCAACAATTTCCCGCATAAAACTCCTTCCAAAACCATTACTTTTCACATCTCTCCGCAGAATCCAATTCCCGCATAAATATTCTACCCGCACCGTCTCTTGCATACAAAACCCAACTCCAAAACGCAATGGAGATATTGTCGTTTTGGGCATCGAAACTAGCTGCGACGACACTGCCGCCGCTGTTGTGAGAAGTGACGGTGAAATTCTGAGCCAGGTGATATCTTCTCAGGCAGATCTGCTTGTGAAGTATGGAGGAGTTGCTCCAAAAATGGCAGAAGAAGCTCACTCACAAGTGATAGACCAGGTTGTGCAAGAAGCCCTTGATAAAGCTTATATGACTGAGAAGGATCTTACCGCAGTTGCTGTTTCTATTGGTCCTGGTTTAAGTCTCTGCCTTCGTGTAGGGGTGCAGAAGGCTCGGAGAATTGCTGGGGGCTTTAATTTACCAATTATTGGCATCCATCACATGGAGGCTCATGCTCTAGTGGCTAGGTTAATTGAGAAAGATTTGCAGTTTCCATTCATGGCCCTACTTATTTCAGGGGGACATAATCTACTCATTCTTGCACGTGATCTTGGCCAATACATACAACTTGGAACTACAATAGATGATGCTATTGGCGAGGCTTATGACAAGTCAGCAAAATGGCTTGGACTTGATTTGAGCAGAAGTGGTGGTCCTGCTATAGAAGAGCTTGCTAGAGAGGGCAATGCTAAATCAGTCAGTTTCTCTATTCCAATGAGGCAGCACAAAGATTGCAACTTCTCGTATGCTGGTCTAAAAACCCAAGTAAGACTGGCAATTGAGTCCAAAAAGATTGATGCCAAAATTCCTATTTCTTCTGCAAGTTATGAAGATCGGTTGTCACGAGCTGACATTGCTGCTTCTTTTCAGCGAATTGCAGTGTTACATCTCGAGGAAAGGTGTGAACGAGCAATACAGTGGGCATTGAAGATGGAGCCTTCTATAAAACACTTGGTTGTCTCTGGTGGTGTTGCATCAAATCAATATGTCCGGGCTCGGCTTGATACGGTTGTGAAGAAGAATGGCCTGCAACTTGTATGCCCTCCTCCCCGGCTTTGTACTGACAATGGTGTAATGGTTGCTTGGACTGGTATTGAGCACTTTCGCGTGGGAAGATATGACCCTCCACCTCCTGCAGAAGATCCAGAAGACTTTGTGTATGATATACGCCCAAGGTGGCCGTTGGGGGAAGAATATGCTGAAGGAAGAAGTGAAGCTCGCTCCGTAAGAACTGCACGCATTCATCCTTCTCTTACATCTCTAATTCAAGCATCATTGCAACAGTGA 1344 0.4516 MLLFLSTTAIPTISRIKLLPKPLLFTSLRRIQFPHKYSTRTVSCIQNPTPKRNGDIVVLGIETSCDDTAAAVVRSDGEILSQVISSQADLLVKYGGVAPKMAEEAHSQVIDQVVQEALDKAYMTEKDLTAVAVSIGPGLSLCLRVGVQKARRIAGGFNLPIIGIHHMEAHALVARLIEKDLQFPFMALLISGGHNLLILARDLGQYIQLGTTIDDAIGEAYDKSAKWLGLDLSRSGGPAIEELAREGNAKSVSFSIPMRQHKDCNFSYAGLKTQVRLAIESKKIDAKIPISSASYEDRLSRADIAASFQRIAVLHLEERCERAIQWALKMEPSIKHLVVSGGVASNQYVRARLDTVVKKNGLQLVCPPPRLCTDNGVMVAWTGIEHFRVGRYDPPPPAEDPEDFVYDIRPRWPLGEEYAEGRSEARSVRTARIHPSLTSLIQASLQQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0973 447 TIGRFAM gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 59 380 IPR017861 -
Tpr4g0973 447 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE 55 426 IPR000905 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 59 72 IPR017861 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 151 IPR017861 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 171 IPR017861 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 186 198 IPR017861 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 209 230 IPR017861 -
Tpr4g0973 447 PRINTS O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 337 346 IPR017861 -
Tpr4g0973 447 SUPERFAMILY Actin-like ATPase domain 58 381 IPR043129 -
Tpr4g0973 447 TIGRFAM T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 58 387 IPR022450 GO:0002949
Tpr4g0973 447 Hamap tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 56 414 IPR022450 GO:0002949
Tpr4g0973 447 Gene3D - 58 388 - -
Tpr4g0973 447 PANTHER TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE, MITOCHONDRIAL-RELATED 55 426 IPR022450 GO:0002949
Tpr4g0973 447 Gene3D - 184 367 - -
Tpr4g0973 447 Pfam tRNA N6-adenosine threonylcarbamoyltransferase 78 381 IPR000905 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0973 K01409 - gmx:100784367 739.569