Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0967 ATGGAAATTGGTATGCTACCAATCTCTGCATCAAAGAGAGGAAAACTCTTAGCTGCTGGTTACACCACACTTCACTCCATTGCCACCACTTCCATCACTCACCTTGCCACAGATATAGAAGTTTCTGAGAGTGAAGCTTTGGAAATTCTGAATTTTGCTACAAGAAACAGTGCTTTGGAAAGATCAAGTGGGAGTAACACTAATGTTATTCAAGGTGGTCAGACTGCTTGGGATATGCTCAATGAGGAAAGGTTTTCTTCTTCCATTACCACTTCTTGTGCTGATCTAGATAACATCCTTGGTGGAGGCATTAATTGCAAAGAAGTCACTGAAATTGGTGGAGTTCCGGGCATCGGCAAAACACAAATAGGGATTCAACTTGCAGTAAATGTCCAGATTCCTCTAGACTATGGTGGCCTAGGTGGGAAGGCAATATACATTGATACAGAAGGAAGCTTTATGGTCGAACGTGTTCTTCAAATTGCTGAAGCATGCATAGAAGATATGTCAGAATATAGCCACCACTTCCACAAGGATAATCAAGCTTATGGAGTTAAAATGCACCCAAATAGTATCTTGGAAAATATATTCTATTTCCGTGTTTGCAGCTATACTGAACAAATTGCTTTGGTAAATTACTTGGACAAATTCGTCACGGAGCATAAAGATGTGAAGATCATCATTATTGACAGTGTTACTTTCCACTTCCGCCAAGACTTTGAAGATATGGCTCTTCGGACTCGATTACTTGGTGAAATGTCTTTAAAGTTGATGAAACTTGCAAAAAATTTCTCTTTGGCTGTTGTTATGTTGAATCAAGTTACAACCAAGCATGTTGAAGGTTCATTTCAGTTGACACTTGCCCTAGGTGATAGCTGGTCGCATTCATGCACGAACCGGATCATCTTATATTGGAATGGCGATGAACGACATGCATACATTGACAAGTCTCCTTCTCTTAAATCAGCTTCAGCACCATATTCTGTGACTTCTAGAGGGATACGTAATTCTACTTCAAGTAGTAAAAGAATCAAGATGGTGTGA 1044 0.3985 MEIGMLPISASKRGKLLAAGYTTLHSIATTSITHLATDIEVSESEALEILNFATRNSALERSSGSNTNVIQGGQTAWDMLNEERFSSSITTSCADLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAYGVKMHPNSILENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFEDMALRTRLLGEMSLKLMKLAKNFSLAVVMLNQVTTKHVEGSFQLTLALGDSWSHSCTNRIILYWNGDERHAYIDKSPSLKSASAPYSVTSRGIRNSTSSSKRIKMV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0967 347 CDD Rad51_DMC1_radA 89 335 IPR033925 GO:0003677
Tpr4g0967 347 PIRSF Rad51 1 340 IPR016467 -
Tpr4g0967 347 ProSiteProfiles RecA family profile 1. 85 274 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Tpr4g0967 347 Gene3D - 14 55 - -
Tpr4g0967 347 Gene3D - 69 338 IPR027417 -
Tpr4g0967 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 335 IPR027417 -
Tpr4g0967 347 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C 1 343 - -
Tpr4g0967 347 Pfam Rad51 74 336 IPR013632 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0967 K10870 - gmx:100527406 544.273