Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0965 ATGGCCCAGTTGAGCAGAATCAACAATTTAGCTCAAATTACCGATTTTTTTCACCATTCATCCAATCCCCACAAACCCAATTCAGCAAAATCTGTTTCATTGAGGTCAAACCTTTGCGGTTCCTCAAAATCATGGAGCTTGAAGCATAAAAATGGAGTCTTTATTGAAAATTGTGATGTGGGTAGGGGAAATTCCTTTGTCATGAAGGCTTCTGCTTCGGTTGCTGCTGCAGAGAAGCCGTCCACGGCGCCGGAGATTGTGTTGGAACCCATTAGTGAAATTTCTGGGACTATTACATTGCCTGGATCAAAGTCTCTATCCAATCGAATTTTGCTTCTTGCTGCTCTCTCTGAGGGAACAACTGTTGTAGAAAACTTGCTGGATAGTGAGGATATTCATTACATGCTTGAGGCATTGAAGACCCTTGGACTTCGTGTAGAAGACGACAAAACAACTAAACAAGCAGTTGTGGAAGGTAGTGGAGGATTATTTCCCACTGGTAGAAAATCTAACGATGAAGTTAATTTATTCCTTGGAAATGCTGGTACTGCAATGCGTCCTTTGACGGCAGCCTTGGTCGCTGCAGGGGGGAATACAAGATACATACTTGATGGGGTGCCCCGAATGAGAGAGAGACCAATCGGGGATTTGGTTTCTGGTCTTAAGCAACTTGGTGCTGATGTTGATTGTTTTCTTGGCACAAACTGTCCACCTGTTCGTATAATTGGGAAGGGAGGGCTTCCTGGGGGAAAGGTGAAACTGTCCGGATCTATTAGCAGTCAGTACTTGACTGCTTTGCTTATGGCAGCCCCATTGGCTCTTGGTGACGTGGAGATCGAGATTGTTGATAAACTGATTTCTGTTCCATATGTCGAAATGACTTTGAAGTTGATGGAGCGCTTTGGAGTCTTTGTAGAACACAGTGCTAATTGGGATAAGTTCTTGGTCCATGGAGGTCAAAAGTACAAGTCTCCTGGAAATGCTTTCGTTGAAGGTGATGCGTCGAGTGCTAGTTACTTCCTAGCTGGTGCAGCAGTTACTGGTGGAACTATCACTGTTATAGGCTGTGGGACAAGCAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTAAAGTTACATGGACAGAAAACAGTGTCACAGTTACCGGGCCTCCACAGGATTCTGGTCGGAAAGTCTTGCAAGGCATTGATGTCAATATGAACAAGATGCCGGATGTTGCCATGACACTTGCTGTTGTTGCACTATTTGCTAATGGTTCCACTACTATTAGAGATGTGGCAAGTTGGAGAGTTAAAGAGACAGAAAGAATGATAGCAATCTGCACAGAACTCAGAAAGCTAGGAGCAACAGTCGAAGAAGGTCCTGATTACTGTGTGATAACACCACCTGAGAAATTGAATGTGACATCAATAGATACATATGATGATCATAGAATGGCCATGGCATTTTCTCTTGCTGCTTGCGGTGATGTTCCGGTTACCATCAAGGATCCTGGTTGCACCAGAAAAACTTTCCCTGATTACTTTCAAGTCCTTGAGAGGTTTACAAAGCATTGA 1575 0.4375 MAQLSRINNLAQITDFFHHSSNPHKPNSAKSVSLRSNLCGSSKSWSLKHKNGVFIENCDVGRGNSFVMKASASVAAAEKPSTAPEIVLEPISEISGTITLPGSKSLSNRILLLAALSEGTTVVENLLDSEDIHYMLEALKTLGLRVEDDKTTKQAVVEGSGGLFPTGRKSNDEVNLFLGNAGTAMRPLTAALVAAGGNTRYILDGVPRMRERPIGDLVSGLKQLGADVDCFLGTNCPPVRIIGKGGLPGGKVKLSGSISSQYLTALLMAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVFVEHSANWDKFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAVTGGTITVIGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPQDSGRKVLQGIDVNMNKMPDVAMTLAVVALFANGSTTIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTSIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFQVLERFTKH* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0965 524 ProSitePatterns EPSP synthase signature 1. 176 190 IPR023193 -
Tpr4g0965 524 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 92 524 IPR006264 GO:0003866|GO:0009073
Tpr4g0965 524 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 89 518 IPR001986 GO:0016765
Tpr4g0965 524 ProSitePatterns EPSP synthase signature 2. 436 454 IPR023193 -
Tpr4g0965 524 PANTHER 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE, CHLOROPLASTIC 3 524 - -
Tpr4g0965 524 PANTHER AROM/DEHYDROQUINATE SYNTHASE 3 524 - -
Tpr4g0965 524 Gene3D Enolpyruvate transferase domain 102 314 IPR036968 GO:0016765
Tpr4g0965 524 CDD EPSP_synthase 94 521 IPR006264 GO:0003866|GO:0009073
Tpr4g0965 524 Gene3D Enolpyruvate transferase domain 320 523 IPR036968 GO:0016765
Tpr4g0965 524 SUPERFAMILY EPT/RTPC-like 86 520 IPR013792 GO:0003824
Tpr4g0965 524 TIGRFAM aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 96 523 IPR006264 GO:0003866|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0965 K00800 - gmx:100811089 867.84