Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0964 ATGTCTCAGCTGAAACAAATGTCGCACTCTGATAACAGTGCTCCATCGACGCCGGGAAAGTTTAAGATGGAGAAAGCTTCTTACTTCAACCGTGTACGGTGGCACACTTCTCCGGCGAAGCTTTGTCTTTGGACATTTGTTTTCTCAGCGGCGATCTTGATCTTCTTTTTCCGTTCTCCGGCGACTTCTCCTCTTCCGGCAGACCCTTCTCGTCGTTCTCTGAGAAGTCCTGCCAGCTGGGGTGGTCCTGTTTGGGAGAAACGTGTTCGTTCCTCCGCTAGAGTCCGGTCTAGAAACGGATTATCCGTTCTTGTGACCGGAGCTGCTGGTTTCGTCGGAACACATGTCTCTGCGGCACTTAAACGCCGCGGAGATGGTGTTCTTGGGATTGATAATTTCAATGACTATTATGACCCTTCTTTGAAGCGTGCACGTCAAGCACTATTGGAAAGAACTGGTGTTTACATTGTTGAAGGTGATATCAATGATGCTGCTTTGTTAAGGAAACTTTTTGAGGTTGTTCCTTTTACTCATGTTATGCATTTAGCTGCTCAAGCTGGTGTGAGGTATGCTATGGAAAATCCTGGTTCTTATGTTCATAGTAACATTGCTGGTTTTGTTAATTTGCTTGAAGTTTGTAAAAGTGTTAATCCACAACCTTCAATTGTTTGGGCTAGTTCTAGTTCTGTTTATGGATTGAATACTAAGGTACCTTTTTCTGAAAGGGATAGAACTGATCAACCTGCTAGTTTGTATGCTGCTACTAAGAAAGCCGGTGAAGAAATTGCTCATACTTATAATCATATATATGGTCTTTCTTTAACTGGTTTAAGGTTTTTCACTGTTTATGGTCCTTGGGGTAGGCCTGATATGGCTTACTTTTTCTTTACTAGAGATATATTGAAGGGGAAGACGATTCCGATTTTTGAGGCAGCGAATCATGGTACCGTTGCTAGGGATTTTACTTATATTGATGATATTGTGAGGGGGTGTTTAGGTGCTTTGGATACTGCTGAGAAGAGTACTGGTAGTGGTGGGAAGAAGAGGGGGCCGGCGCAGTTGAGGGTTTTCAATTTGGGGAATACCTCACCTGTTCCTGTTACTGATCTTGTGAGTATTTTGGAGAGGTTGTTGAAGACTAAGGCAAAGAGGAATATTATGAAGTTGCCGAGGAATGGGGACGTGCCTTTTACTCATGCGAATATTAGCTATGCACAGAGAGAGCTTGGTTATAAGCCTGTGACGGATCTGCAGACCGGTTTGAAGAAATTTGTGAGGTGGTACTTGAATTACTATGCTGGTGGGAAGAAAGCTGTTGAGTGA 1323 0.4354 MSQLKQMSHSDNSAPSTPGKFKMEKASYFNRVRWHTSPAKLCLWTFVFSAAILIFFFRSPATSPLPADPSRRSLRSPASWGGPVWEKRVRSSARVRSRNGLSVLVTGAAGFVGTHVSAALKRRGDGVLGIDNFNDYYDPSLKRARQALLERTGVYIVEGDINDAALLRKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTKVPFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKTIPIFEAANHGTVARDFTYIDDIVRGCLGALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVTDLVSILERLLKTKAKRNIMKLPRNGDVPFTHANISYAQRELGYKPVTDLQTGLKKFVRWYLNYYAGGKKAVE* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0964 440 PRINTS Nucleotide sugar epimerase signature 129 145 - -
Tpr4g0964 440 PRINTS Nucleotide sugar epimerase signature 319 334 - -
Tpr4g0964 440 PRINTS Nucleotide sugar epimerase signature 354 369 - -
Tpr4g0964 440 PRINTS Nucleotide sugar epimerase signature 394 411 - -
Tpr4g0964 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 433 IPR036291 -
Tpr4g0964 440 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 12 438 - -
Tpr4g0964 440 Pfam NAD dependent epimerase/dehydratase family 103 340 IPR001509 -
Tpr4g0964 440 Gene3D - 102 434 - -
Tpr4g0964 440 PANTHER EPIMERASE-RELATED 12 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0964 Tpr-Chr4 9268897 9271520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0964 4 438 Miscellaneous Gene Families AT4G00110 86.437 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0964 K08679 - gmx:100788739 807.364