Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0953 ATGCATAGATCTGGAGCTACGATGGCTTGGAACGTGTTCAAGTTCTGCACAGCTTTACGAGGACTTGGTTCGATTATGATTCTTCTTGTTCTTGGTGTTGTTGGTGTTACTTATTATGCTGTTGTTATTACAAATTATGTTCCTGCTTTGTATAATGGAGGCTTTGATTCTCTTATTGCTATCTTGGTCTTGATCTTGTTTCATAGTTTGTTGGTTATGCTATTATGGAGTTATTTTTCCGTTGTTTTTATCGATCCGGGAAGTGTACCTCCGAACTGGAGACCAACAATTGATGAGGAGATAGGAGAGGAAGATCCATTAGTTGGTTCAGAATTCAGTAACGTTCAGTCTGATCCGTCCAATCAACGGATCCGGTACTGTAGGAAGTGCAACCAGCTGAAGCCACCTCGATGCCATCATTGTTCAGTTTGTGGGCGATGTGTGCTGAAGATGGACCACCATTGTGTGTGGGTAGTTAACTGTGTCGGGGCACTAAATTACAAGTATTTCCTTCTTTTCTTGTTCTACACTTTCCTTGAGACGAGTCTAGTGACTGCATCCTTACTGCCACATTTTATAGCATTCTTTAGTGATGGAGAAATCCCTGGGACACCTGGATCTCTTGCTACAACTTTTCTTGCTTTTGTTTTGAACCTCGCTTTCGCGTTGAGTGTGTTGGGATTTCTTATCATGCACATATCGTTGGTTGCTGGTAATACGACCACTATTGAGGCATATGAGAAGAAAACTACTCCAAAATGGCGTTACGACCTTGGCCGGCGTAAAAATTTTGAACAGGTTTTTGGGATGGACAAGAAATACTGGTTCATTCCTGCTTATTCAGAAGAAGATATACGAAAGATGCCAGCTCTACAAGGCCTCGAGTATCCATCAAAACCCGACTTTGATTCCCAATAG 918 0.4194 MHRSGATMAWNVFKFCTALRGLGSIMILLVLGVVGVTYYAVVITNYVPALYNGGFDSLIAILVLILFHSLLVMLLWSYFSVVFIDPGSVPPNWRPTIDEEIGEEDPLVGSEFSNVQSDPSNQRIRYCRKCNQLKPPRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETSLVTASLLPHFIAFFSDGEIPGTPGSLATTFLAFVLNLAFALSVLGFLIMHISLVAGNTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSEEDIRKMPALQGLEYPSKPDFDSQ* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0953 305 PANTHER S-ACYLTRANSFERASE 14 299 - -
Tpr4g0953 305 ProSiteProfiles DHHC domain profile. 125 175 - -
Tpr4g0953 305 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 14 299 - -
Tpr4g0953 305 Pfam DHHC palmitoyltransferase 121 248 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0953 Tpr-Chr4 9170787 9175882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0953 8 305 Lipid Metabolism Gene Families AT4G22750 67.000 3.11e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0953 K20028 - gmx:100794887 529.635