Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0951 ATGTCCCTATCAGATTCTGAAACCAACTATGGCAGTAGTGGTGGATCCGAGTACAAGCCTTTTCGTCATATCAGCCGCGATAGATTATTATATGAAATGCTTGGATCAGCAAAGTCACCGGATTCAAAAGCATGGAAGGTTCTCATAATGGACAAAGTTACAGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATTACAGACCAAGAAGTTTCTTTGGTGGAAGACCTTTTCCGGAGAAGGCAACCATTACCATCATTGGATGCTGTTTATTTCATCCAGCCTTCGAAAGAGAATGTGGTCATGTTCTTGTCTGATATGTCTGGAAGGGAGCCCCTATACAAGAAAGCCTATATATTTTTCTGCTCACCAATCCCAAAGGAGCTTGTAAACCACATCAAGGGTGATACAAGTGTCTTACCTCGCATAGGCGCATTGAGAGAGATGAATTTGGAATACTTTCCGATAGATAGCCAGGGGTTTTCCACTGATCAAGAAACAGCCCTGCAAGAACTTTACGGCACTATGGACAATGTTCGTAGATTTAATACTTGCTTGAATACTATGGCAATTCGAATAGCTACAGTTTTTGCATCACTGAAGGAGTTACCGAATGTGTGGTATCGTTCAGCAAAGGAAAGTGACGAATCTAATCCAACAGCAGGTCGTGAATTAGTTCCTAGCAAGCTTGCTGATGCAGTTTGGGACATGGTTTCTAAATATAAATCTACTATTCCCAAATTTCCACAGAGTGAAACATGCGACCTGATCATTATTGACAGAACCATTGATCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGGATATGGATGGAAATAAATATATGCATGAGGTTCCCAGCAAATCCGGAGGTCCACCTGAGAAAAAGGAGGTCCTTCTAGAAGAACATGATTCAGTCTGGCTTGAACTTCGACATGCACATATAGCAGATGCTAGTGAGAGATTGCATGAAAAGTTTACCACCTTTAAGTCAAAGAACAAAGCAGCACAAATTCACCAAAGTTCAAGAGATGGTGGTGAATTATCTACACGAGATTTGCAAAAAATGGTTCAAGCTTTGCCTCAATACACTGAGCAAATGGAAAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATCAACACAATTATCAGAGAAAACAATCTCCGAGGGCTAGGACAGTTGGAGCAGGATCTTGTTTTCGGGGATGCTCAAGCCAAGGACGTTATTAACTTTTTAAGAACAAATCAGAATATGACTCCTGAATATAAGCTACGGTTGTTGATGATCTATGCAACAGTCTACCCTGAGAAGTTTGAGGGTGATAAAGGTTTAAAGCTAATGCAGTTGGCAAAACTATCGCCCGATGACATGAAAGTTATCAGTAATATGCAACTACTTGCGGGATCATCAAAAAATAAGGCAGCTACTACTGGCGGTGGTTTCTCATTGAAGTTCAATAACCAGAAGACAAAGCAAGCAGCACGCAAGGATCGTACTGACGAAGAGGAAGAACAATGGTCACTATTTCGATTTTATCCCGTTTTGGAGGAGCTCATTCAAAGTCTTAATAAGGGTGGATTGCCAAAGACTGACTATGCATGTAAAAATGAACCGATTCCTGCTCCACAAGCAAACTCTACTCAATCCGGTAAAAGCAATCAGACAGCTCCACCTCCGACCACCGCTCCTCATTCAATGAGATCTAGACGGACAGCCAATTGGGCTAAGAGAGGTACTTCTGACGATGGATATTCAAGTGACTCCACGTTAAAGAACGTAACTGCTGATTTCAAGAAGATGGGAAAGCGAATCTTTGTGTTTATTATTGGCGGGGCTACTCGATCTGAGCTACGTGTTTGTCACAAAATGACAACAAAACTAAAAAGGGAAGTAATCCTAGGCACCACTTCCATGGATGATCCTCCACAATATCTTACGAAATTGAAGTTATTATGCGACAGTCATATTGCACTGGACGGCCTTGGAATATGA 2025 0.4128 MSLSDSETNYGSSGGSEYKPFRHISRDRLLYEMLGSAKSPDSKAWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPSLDAVYFIQPSKENVVMFLSDMSGREPLYKKAYIFFCSPIPKELVNHIKGDTSVLPRIGALREMNLEYFPIDSQGFSTDQETALQELYGTMDNVRRFNTCLNTMAIRIATVFASLKELPNVWYRSAKESDESNPTAGRELVPSKLADAVWDMVSKYKSTIPKFPQSETCDLIIIDRTIDQIAPVIHEWTYDAMCHDLLDMDGNKYMHEVPSKSGGPPEKKEVLLEEHDSVWLELRHAHIADASERLHEKFTTFKSKNKAAQIHQSSRDGGELSTRDLQKMVQALPQYTEQMEKISLHVEIAGKINTIIRENNLRGLGQLEQDLVFGDAQAKDVINFLRTNQNMTPEYKLRLLMIYATVYPEKFEGDKGLKLMQLAKLSPDDMKVISNMQLLAGSSKNKAATTGGGFSLKFNNQKTKQAARKDRTDEEEEQWSLFRFYPVLEELIQSLNKGGLPKTDYACKNEPIPAPQANSTQSGKSNQTAPPPTTAPHSMRSRRTANWAKRGTSDDGYSSDSTLKNVTADFKKMGKRIFVFIIGGATRSELRVCHKMTTKLKREVILGTTSMDDPPQYLTKLKLLCDSHIALDGLGI* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0951 674 PANTHER PROTEIN TRANSPORT SEC1A 22 662 - -
Tpr4g0951 674 MobiDBLite consensus disorder prediction 553 579 - -
Tpr4g0951 674 Gene3D - 397 522 - -
Tpr4g0951 674 Gene3D - 15 149 IPR043154 -
Tpr4g0951 674 SUPERFAMILY Sec1/munc18-like (SM) proteins 23 661 IPR036045 -
Tpr4g0951 674 MobiDBLite consensus disorder prediction 553 598 - -
Tpr4g0951 674 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 278 394 IPR043127 -
Tpr4g0951 674 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 22 662 IPR001619 GO:0016192
Tpr4g0951 674 Gene3D - 154 277 IPR027482 -
Tpr4g0951 674 Pfam Sec1 family 46 656 IPR001619 GO:0016192
Tpr4g0951 674 PIRSF VPS45_Sec1 16 668 IPR001619 GO:0016192
Tpr4g0951 674 Gene3D - 555 665 IPR027482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0951 Tpr-Chr4 9149942 9159583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0951 K15292 - gmx:100783301 1113.6