Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0865 ATGATGAAGAGATTAATGGGTGGACCTGGAACAACGAGTGGATTCTTATTGAGGTTTGGACAATGTGCATTTGGTGCTGCTTCTATTAGCGTTATGACTTCAGCCCCTGGATTCTCTACCATCACCGCTTTCTGCTATTTAACTGCATCAATGGGACTTCAAGTGCTCTGGAGCTTGGGACTTGCATGTCTTGATATTTATGCTTTGAGAAGAAAGAGAGACCTACAAAATCCAATTCTTGTTAGCCTTTTTGTCGTAGGCGATTGGGTAACAGCCATTTTGTCACTAGCAGCTGCATGCTCATCAGCAGGAGTCATAGTTTTATATTCGAAAGACGTGGATATGTGTGCAGTTCATAAGAATATTCCTTGCCACAGTTACCAGGTTTCTGTGGCCATGGCTTTCGTCACTTGGGGTCTTACAGCTGTGTCATCGCATGTGATGTTTTGGATATTGGCCTCAGTCTAG 468 0.4359 MMKRLMGGPGTTSGFLLRFGQCAFGAASISVMTSAPGFSTITAFCYLTASMGLQVLWSLGLACLDIYALRRKRDLQNPILVSLFVVGDWVTAILSLAAACSSAGVIVLYSKDVDMCAVHKNIPCHSYQVSVAMAFVTWGLTAVSSHVMFWILASV* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0865 155 Pfam Casparian strip membrane protein domain 9 139 IPR006702 -
Tpr4g0865 155 PANTHER CASP-LIKE PROTEIN 5B3 2 155 IPR045009 -
Tpr4g0865 155 PANTHER CASP-LIKE PROTEIN 5B2 2 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0865 Tpr-Chr4 8186513 8192347 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0865 - - ccaj:109817576 256.144