Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0863 ATGGTGATGGTCGTGGCATTGGCAATGCCACGGCGTCACAAGACGGTGCCGGAGTCTGCAACCCTCGGCATCCTTGCCTTTGACGCCGGCAAGACTATGTGTCGCCTGATCTCTCTCTACCACTCCCTCTCTGACGAAGAAATCACCAAACTCCACCACGATGTCATCAAATCCAAAGGTGTAACATATTTAAATTCCAACCAAGAAAATTTCCTCATCAACCTCGCCGCTGCCGAACGCCTAGAGGAGCTCGACAACATTGCTGCAACTGTCTCCCGTCTAGGCCAAAAGTGCTCTGACCTCAGCCTAGCACGATTTGACCTTGTATATGCCGATCTCAAACACGGTGTCATTGACCTCGGGAAGCTGCAATACAATTCCCGGAACACCCACAAAATCGTGGACAAATCCGAGAAACTCATCTCCGCAACTGCTAGTCTCCACTCTGCCATGGAATACTTGGCAGAGTTTGAGGCTGCGGAGAAAAAAAGACAACAACAACAACGTTATTGGGACATATCAAAACCATCTTTAAAGCAAAACTTGGAACATTTCAACGAGAAATTAGTGCACCAAAGAAAGCAAGTGCAACATTTAAAGGAAACATCGTTATGGAAACGAACATTCGACAAAATCATTGGGATCATGGCAAGGCTTGTGTGCATTGTGTATGCAAGAATATGCTCCGTTTTCGGCGCATATGTTAATACCGAAAAGAATGACAAAAACAGTTTCATACGCTTCGGTTTTGGTTTCGACGATTGTTGCCTTCTGGAACACCGCGAGTTGTATCATAATACAGCTCGCAGGGTTTCAGAATGGTACGAGGAATCCCATCCGAAGCGTGGTATGAGGTGCGGGCCTATTTCCAAAGAAGCAACAACAACTAAAACTGGTGGAATCAGATTTCTCAATAAGCCTATGCCAATGGATTTTGCGCCTGGTGGCGGTGAAATTGAGAAAATGATGAATGGTAATAATGATAGAGTTTTGAAGATGGCGCCTCCATCCACTGTGGGTGGAGTTGGGCTTTCTTTGAGGTATGCTAATGTGATTCTATCGGCGGAGAGTTGTCTCCACGGGCCAACGACGGTAGGAGATGACGCGCGTGAGGCATTGTACGAGATGTTACCGGGGAGGTTGAGGGTGAAGGTAAGGGCGAAGCTGAAGGGACGTTTGGCGAAGGGAAGCGAAGGAAGTGACGGGCACAAGCTTGCAGAAGGGTGGCGGGAGGCGGTGGAGGAGTTGATGGAATGGCTATCACCGATGGCCCACGACACTCTCCGGTGGCAGAAGGAGAGGCATTTGGAAAATACGAAATTCGAGACAAAGCCTACGGCGATGCTTCTGCAGACATTGCATTACTCTGACTTGGAGAAGGCAGAGACTGCCATAGTAGAAGTTTTGGTTGGGTTGAGTTGTATATATTGGTGTGAGAGAAGAGTGTAG 1449 0.4796 MVMVVALAMPRRHKTVPESATLGILAFDAGKTMCRLISLYHSLSDEEITKLHHDVIKSKGVTYLNSNQENFLINLAAAERLEELDNIAATVSRLGQKCSDLSLARFDLVYADLKHGVIDLGKLQYNSRNTHKIVDKSEKLISATASLHSAMEYLAEFEAAEKKRQQQQRYWDISKPSLKQNLEHFNEKLVHQRKQVQHLKETSLWKRTFDKIIGIMARLVCIVYARICSVFGAYVNTEKNDKNSFIRFGFGFDDCCLLEHRELYHNTARRVSEWYEESHPKRGMRCGPISKEATTTKTGGIRFLNKPMPMDFAPGGGEIEKMMNGNNDRVLKMAPPSTVGGVGLSLRYANVILSAESCLHGPTTVGDDAREALYEMLPGRLRVKVRAKLKGRLAKGSEGSDGHKLAEGWREAVEELMEWLSPMAHDTLRWQKERHLENTKFETKPTAMLLQTLHYSDLEKAETAIVEVLVGLSCIYWCERRV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0863 482 Pfam Protein of unknown function (DUF668) 338 429 IPR007700 GO:0045927
Tpr4g0863 482 Coils Coil 182 202 - -
Tpr4g0863 482 Pfam Domain of unknown function (DUF3475) 24 79 IPR021864 GO:0045927
Tpr4g0863 482 PANTHER BNAC09G50660D PROTEIN 14 481 - -
Tpr4g0863 482 PANTHER OS10G0380300 PROTEIN 14 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0863 Tpr-Chr4 8156270 8158176 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0863 - - gmx:100796635 555.444