Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0861 ATGGCAACTTCTGTTACAAATGTTGGAGCCATTAACATGGCACAGTTGAGATTGAATGGCTCTAGCAATGGAATTCCTATGACAAGTTCAGCATTTTTTGGAAAAAGCCTTAAGAAAACCAGTTCACTGATTTCCAGCCAGAAGAGTTTGTCTGGTAATTTCAAGGTTTCCGCGCAGGTCGAATATGATGAGGAAAAGCAGACCTCAAAGGACAGATGGGCTGGACTTGCTTATGACACCTCAGATGATCAGCAAGATATCACTAGAGGGAAGGGAAAGGTGGACAGTGTTTTCCAAGCTCCAATGGGATCTGGAACTCACTATGCTATCATGAGTTCCTATGATTATATTAGTGCCGGCCTTCGCCAGTACAATATGGACAATACAATTGATGGCTTGTATATTGCACCAGCATTTATGGACAAGCTTGTTGTTCATATCACCAAGAACTATCTAAGCTTGCCAAGTGTTAAGATTCCTCTCATTTTGGGAATTTGGGGAGGAAAAGGTCAAGGGAAGTCATTTCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAGCCCTATAATGATGAGTGCTGGAGAATTAGAAAGTGGAAATGCCGGAGAGCCTGCAAAGTTGATTAGGCAAAGGTACCGTGAGGCGGCCGACATTATCAAAAAAGGAAAGATGTGTTGTCTCTTCATCAATGATCTTGATGCAGGAGCTGGTAGACTTGGTGGCACTACTCAATACACAGTCAACAACCAGATGGTAAATGCAACCCTTATGAACATTGCTGACAACCCTACCAATGTTCAACTTCCTGGTATGTACAACAAGGAGGATAATCCTCGCGTCCCTATCATAGTCACCGGTAATGATTTCTCAACATTGTATGCTCCTTTAATTCGTGATGGTCGTATGGAAAAATTCTACTGGGCGCCTACTCGTGAGGATCGGATCGGTGTCTGTCAAGGTATTTTCAGGTCAGATGGTGTCCCTAAGGATGACGTTGTCAAGCTTGTTGACACTTTCCCTGGACAGTCCATTGACTTTTTTGGTGCTTTGAGGGCTAGAGTGTATGATGATGAAGTCAGGAATTGGATTTCTGGTATTGGTGTCGAGAGTATTGGGAAAAGGCTTGTGAATTCAAAGGAAGGACCTCCAACTTTTGAGCAACCAAAAATGACTATTGACAAGCTACTAGAGTATGGAAATATGCTTGTTCAAGAACAAGACAATGTAAAGAGAGTTCAGTTAGCTGACAAATACCTCAGTGAGGCAGCTCTTGGTGATGCAAATGATGATGCTATCAAGACTGGAAACTTCTACGGACAAGGAGCTCAGCAAGTTAATTTTCCTGTCCAACAAGGTTGTGCTGACCCTTATGCAGAAAACTATGATCCAACAGCCAGAAGTGACAATGGAAGCTGCACATACAATTTGTAG 1431 0.4277 MATSVTNVGAINMAQLRLNGSSNGIPMTSSAFFGKSLKKTSSLISSQKSLSGNFKVSAQVEYDEEKQTSKDRWAGLAYDTSDDQQDITRGKGKVDSVFQAPMGSGTHYAIMSSYDYISAGLRQYNMDNTIDGLYIAPAFMDKLVVHITKNYLSLPSVKIPLILGIWGGKGQGKSFQCELVFAKMGISPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRSDGVPKDDVVKLVDTFPGQSIDFFGALRARVYDDEVRNWISGIGVESIGKRLVNSKEGPPTFEQPKMTIDKLLEYGNMLVQEQDNVKRVQLADKYLSEAALGDANDDAIKTGNFYGQGAQQVNFPVQQGCADPYAENYDPTARSDNGSCTYNL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0861 476 Pfam ATPase family associated with various cellular activities (AAA) 165 306 IPR003959 GO:0005524|GO:0016887
Tpr4g0861 476 PANTHER - 1 475 IPR044960 -
Tpr4g0861 476 Gene3D - 310 422 - -
Tpr4g0861 476 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 333 IPR027417 -
Tpr4g0861 476 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 475 - -
Tpr4g0861 476 Gene3D - 125 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0861 Tpr-Chr4 8138725 8142458 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0861 - - gmx:100795298 837.025