Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0812 ATGGAGGACACCATCCCTCTCTTTCTAACATGCTTCATCACACTCTTCACAATATTCCCAACCCCAACACGTGCCACTCTCCCAGGCACGTGGGAGCTTCTAATCCCAAATGCAGGCATAGCTTCAATGCACACAGCAGTAACACGCTTCAACAACGTAATCCTTTTAGACCGAACCAACACCGGTCCATCACGTAAACTCCTCCCAAAAAACCACTGCCGGTTCGACCGAAACGACGCCGTTTTAAAAAAAGATTGTTACGCTCACTCAATTCTCTTCGACCCCAAAAAAAACCAACTCCGTCCCTTAAAAATCCTCACTGACACGTGGTGTTCTTCCGGTGCGTTTCTCCCTAACGGAACACTTTTACAAACCGGCGGTGATATAGACGGGTTCAAAAAGATCCGAAAATTTGACCCGTGTAATTCAAACGGGTCATGCGATTGGGAAGAGTTAAACGACGTCGAATTAAGCGAAGGTCGTTGGTATGCAACGAATCAAATTCTTCCAGATGGTTCTATTATTATCATCGGTGGAAGAGGTTCAAATTCTGTTGAATTTTATCCTAAACGTAAAAACGGTGCCGTTTCGTTTCCTTTTCTTTCTGAAACTGAAGATACTCAAATGGATAATCTATACCCTTACGTTCATCTTCTTCCTAACGGTAAACTCTTCGTGTTCGCGAATACGAAATCGGTTATGTACGATTTTGTTGAAAATCGTGTCGTGAAGGTTTATCCGGAGTTGATCGGTGGTCCGAGAAACTATCCGTCGGCGGGGAGTTCTGTTATGTTGGCTTTGGAAGGTGAATTTTCTGAGGCGGTGGTTGTTGTTTGTGGCGGTGCTCAATACGGTGCGTTTCTTGAACGGAATGTGGATACGCCGGCGCATGGGAGTTGTGGTCGGATAATGGCGACGGGATCCGACCCGGTTTGGGAAATGGAGGACATGCCGTTTCAGAGAATTATGGGTGATATGGTAATTTTACCAAACGGTGATGTTTTGATCATAAATGGTGCTATGAAAGGAACACAAGGTTTTGAATTGGGTTCAGATCCGTGTTTGAATCCGGTTTTATATCGACCCGATGAACCAGCCGGGTTACGGTTCATGGTTTTGAATCCGGGTACTGTACCGAGACTTTACCATTCAACGGCGAATTTGTTACCGGACGGAAGAGTTTTACTAGCGGGAAGTAATCCACACGTGTTTTATCGATTCGATGTTGAGTTTCCGACGGAGTTAAGAATTGAAGCGTTTTCGCCCGAGTATTTGGATCCGGATAAGATGAATATCCGACCCGAGATTTTGGAAGTGCCTGAACAGGTGTCGTATGGTGTGGGTTTTGATGTTGTTGTGATTGTTGAGTTACCTGTTGTGGGAATTATTGAAGTGAATTTGGGCAGTGCTCCTTTTGCTACTCATTCTTTTTCTCAAGGTCAACGGTTGGTCAAACTTGGGGTTGGTTCGGCTGTGCCGGAGAATGGTGGGAGATGGAGGATTAGATGTACAGCGCCGCCGAGTGGGATGGTTGCGCCGCCTGGATTTTATATGGTTTTTGCGGTTAATCAAGGTGTTCCAAGTGTAGCACGTTGGATACATGTGTCATAG 1611 0.4556 MEDTIPLFLTCFITLFTIFPTPTRATLPGTWELLIPNAGIASMHTAVTRFNNVILLDRTNTGPSRKLLPKNHCRFDRNDAVLKKDCYAHSILFDPKKNQLRPLKILTDTWCSSGAFLPNGTLLQTGGDIDGFKKIRKFDPCNSNGSCDWEELNDVELSEGRWYATNQILPDGSIIIIGGRGSNSVEFYPKRKNGAVSFPFLSETEDTQMDNLYPYVHLLPNGKLFVFANTKSVMYDFVENRVVKVYPELIGGPRNYPSAGSSVMLALEGEFSEAVVVVCGGAQYGAFLERNVDTPAHGSCGRIMATGSDPVWEMEDMPFQRIMGDMVILPNGDVLIINGAMKGTQGFELGSDPCLNPVLYRPDEPAGLRFMVLNPGTVPRLYHSTANLLPDGRVLLAGSNPHVFYRFDVEFPTELRIEAFSPEYLDPDKMNIRPEILEVPEQVSYGVGFDVVVIVELPVVGIIEVNLGSAPFATHSFSQGQRLVKLGVGSAVPENGGRWRIRCTAPPSGMVAPPGFYMVFAVNQGVPSVARWIHVS* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0812 536 SUPERFAMILY E set domains 431 535 IPR014756 -
Tpr4g0812 536 Gene3D Immunoglobulins 432 536 IPR013783 -
Tpr4g0812 536 Gene3D - 26 431 IPR037293 -
Tpr4g0812 536 SUPERFAMILY Galactose oxidase, central domain 75 426 IPR011043 -
Tpr4g0812 536 Pfam Galactose oxidase-like, Early set domain 433 535 IPR015202 -
Tpr4g0812 536 CDD E_set_GO_C 431 535 IPR015202 -
Tpr4g0812 536 Pfam Glyoxal oxidase N-terminus 43 281 IPR009880 -
Tpr4g0812 536 PANTHER - 14 535 - -
Tpr4g0812 536 PANTHER SECRETED PROTEIN-RELATED 14 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0812 Tpr-Chr4 7543779 7546168 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0812 - - ahf:112748634 871.692