Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0798 ATGTATTTACGGCGCGGAATCCAAATCTCTTATCCCTTATTATATAAAGGATTGAAATCCACTTCAACAGGTCATCAAAACCTCATACCAACATCTTTCAACTCTAAGCTTACTCTTTTTCATTCTCAATCCATAATGGGTATGGTATTTGGCAAAATTGGTGTTGAGACACCAAAATATGAAGTGATAAAAACCACAGAAGAATATGAAATCAGAAAATATGCACCTTCTGTTGCAGCTGAAGTTACCTATGATCCATCACAGTTCAAAGGAAACAAAGATGGTGGCTTTATGGTTTTAGCAAACTATATTGGAGCTTTAGGGAACCCTCAAAACACAAAACCTGAAAAGATTGCTATGACTGCACCAGTTATCACAAAGGATGCTGGAGAAAAGATAGCTATGACAGCACCAGTAGTGACCAAAAGTGGCGGCAGCGAAGACGAGAAGAAGAATAAGATGGTGACTATGCAGTTTATTTTGCCAGCTACTTATGCAAAAGCTGAGGAAGCACCTAAGCCAACGGATGAGAGGGTTGTGATAAGAGAAGAAGGTGAGAGGAAATATGGTGTGGTGAAGTTTGGAGGTGTGGCAAGTGATGAAGTTGTGAAGGAGAAGGTGGAGAAGTTGAGATTGAGTTTGGAGAAAGATGGTTTTAAGGTTGTTGGGGATTTCTTGTTGGGTAGGTATAATCCACCTTGGACAATTCCGATGTTTAGGACTAATGAAGTTATGATTCCTGTTGAATGA 750 0.396 MYLRRGIQISYPLLYKGLKSTSTGHQNLIPTSFNSKLTLFHSQSIMGMVFGKIGVETPKYEVIKTTEEYEIRKYAPSVAAEVTYDPSQFKGNKDGGFMVLANYIGALGNPQNTKPEKIAMTAPVITKDAGEKIAMTAPVVTKSGGSEDEKKNKMVTMQFILPATYAKAEEAPKPTDERVVIREEGERKYGVVKFGGVASDEVVKEKVEKLRLSLEKDGFKVVGDFLLGRYNPPWTIPMFRTNEVMIPVE* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0798 249 Gene3D Regulatory factor, effector binding domain 54 127 IPR011256 -
Tpr4g0798 249 Gene3D Regulatory factor, effector binding domain 128 249 IPR011256 -
Tpr4g0798 249 SUPERFAMILY Probable bacterial effector-binding domain 46 126 IPR011256 -
Tpr4g0798 249 PANTHER HEME-BINDING PROTEIN-RELATED 47 249 IPR006917 -
Tpr4g0798 249 SUPERFAMILY Probable bacterial effector-binding domain 129 249 IPR011256 -
Tpr4g0798 249 PANTHER - 47 249 - -
Tpr4g0798 249 Pfam SOUL heme-binding protein 55 126 IPR006917 -
Tpr4g0798 249 Pfam SOUL heme-binding protein 129 247 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0798 Tpr-Chr4 7407123 7408335 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0798 - - ccaj:109799602 375.17