Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0793 ATGAAAGGGGTGCTTACGCTTCAGCTATGGAATCCACCACCACGCTTCCATACTCTATCCTTCTCCCACCACCCTCTCACAATCTCAGCCTCAACCACCACCACCACCACCTCCTCCACCCAACAACAACCACCACATGAACTCCTCACAGCAAAAGAAAGAAGACGCTTAAGAAACGAACGCAGAGAGAGCAAGAACACAACAAATTGGAAAGAAGAAGTTGAAAATAAACTCATTAAGAAAACCAAAAAAGAGAAAATACATTGGATGGATGAACTCAATCTTGATAATCTCATTAAATTAGGTCCTCAGTGGTGGGGTGTTCGTGTTTCTCGTGTTACGGGTCAGTATACTGCTGAAGCACTTGCTCGTTCTTTGGCTAAGTTTTTTCCTGATACGGATTTTCAGGTATATGCTCCAGCTATCAATGTGAAAACGAAATTGAAGAATGGTTCCATCTCCGTAAAACCAAAGCCTCTATTTCCGGGTAATATTTTTCTGAGATGTGTACTGAACAAACCATTACATGACTTCATAAAAGAGTATGATGGGGTTAATGGCTTTATTGCATCCACGATTGGAAATACAAAGAAACAAATTAAAAAACCAAAGCCAATAGATGAGGTTGATATGGAAGCAATATTCAAACAGGCAAAAGTGGAGCAAGAAAATGCTGATAAAGCATTTGAGGAAGAACAGAAAAATGCTGCCATAATCTCTTCGAATCCGAATTCAGAGTTAGAATCAGATGTTTCAAAAACTATTGTTGATTCTAAGCCTAAAAGGGGCTCTAGAAAAACCTCAGACCAACTCACTGTCACAGAAGAAGCTTCACCTGCTAAAAAAATTCCTAAACTTGCCACTGGTTCCACTGTTAGAATTATATCTGGAACATTTTTAGGGTTTACAGGCACACTCAAGAAGCTAAGCCGCAAAACCAAAATGGCCACGGTGCATTTAACAATATTCGGGAAAGAGAACATAGTAGACCTAGATATTAGTGAAATTGCTCCAGAGACTAACTAA 1026 0.3967 MKGVLTLQLWNPPPRFHTLSFSHHPLTISASTTTTTTSSTQQQPPHELLTAKERRRLRNERRESKNTTNWKEEVENKLIKKTKKEKIHWMDELNLDNLIKLGPQWWGVRVSRVTGQYTAEALARSLAKFFPDTDFQVYAPAINVKTKLKNGSISVKPKPLFPGNIFLRCVLNKPLHDFIKEYDGVNGFIASTIGNTKKQIKKPKPIDEVDMEAIFKQAKVEQENADKAFEEEQKNAAIISSNPNSELESDVSKTIVDSKPKRGSRKTSDQLTVTEEASPAKKIPKLATGSTVRIISGTFLGFTGTLKKLSRKTKMATVHLTIFGKENIVDLDISEIAPETN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0793 341 MobiDBLite consensus disorder prediction 48 69 - -
Tpr4g0793 341 SUPERFAMILY Translation proteins SH3-like domain 286 336 IPR008991 -
Tpr4g0793 341 MobiDBLite consensus disorder prediction 31 47 - -
Tpr4g0793 341 MobiDBLite consensus disorder prediction 31 69 - -
Tpr4g0793 341 SMART nusgn_4 102 218 IPR006645 GO:0140673
Tpr4g0793 341 MobiDBLite consensus disorder prediction 252 269 - -
Tpr4g0793 341 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 32 338 IPR043425 -
Tpr4g0793 341 CDD KOW_NusG 283 336 - -
Tpr4g0793 341 PANTHER TRANSCRIPTION ANTITERMINATION PROTEIN RFAH 32 338 - -
Tpr4g0793 341 Gene3D - 287 338 IPR014722 -
Tpr4g0793 341 Pfam Transcription termination factor nusG 121 214 IPR006645 GO:0140673
Tpr4g0793 341 Pfam KOW motif 289 319 IPR005824 -
Tpr4g0793 341 SUPERFAMILY N-utilization substance G protein NusG, N-terminal domain 104 218 IPR036735 GO:0006355
Tpr4g0793 341 MobiDBLite consensus disorder prediction 239 279 - -
Tpr4g0793 341 Gene3D - 103 221 IPR036735 GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0793 - - lja:Lj0g3v0333779.1 417.542