Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0776 ATGAGAATTACATTATTAGTTTCATTCTTTCTGTGCTACTACTACTGCATATATATCACTCATGCATCTCCCAATTGTCTTGAGGATCAACAATCTTTGTTGCTCCAATTAAAAAACAATTTCACATTTCTTGATCGAAAACAATTATATTCTCCCATCATCCATGAAATAATTAGTCGTTCCACCAAACTAAGAACGTGGATTAAAACGACTGCTTGCTGCAATTGGAGTGGTGTTACCTGTGACAATAAGGGACGTGTTATTGGTCTTGACCTTAGTGGAGAACATATCATTGGCGGATTTAACAATTCAAGTAGTCTTTTTAGTCTTGTACATCTCCAGAAACTGAACTTGAATGACAACTATTTCAATACTTCCATTCCATCAGGATTCAGCAAGTTGGAGAAGTTGACATATCTGAATTTGTCAATGGCTGGATTTTTAGGGCAGATTCCTGCTGAGATTTCACAGCTTACAAGGTTGGTAACTCTTGATCTCTCTTTCATTTCCTACTCGACAAAACCTCAGATCCCAAATCTGCAAAAGTTTATCCAAAATCTGACCAAAATTAGGAAATTGTATCTTGATGATATAAGTATAACATCTCAAGGACATGAATGGAGCAACGCTTTGTTTCCGTTGCGTGACTTGCAAGAGTTGAGCTTGTATAACTGTGATCTATCAGGACCCCTTGATTCTTCCCTAACAAAACTAGAGAACCTTTCAATCATTATTCTTGATGGTAACAATTTTTCATCTCCAATTCCAGAAAAATTTGCAAATTTAAAAAACCTTACCACCCTCCGTCTTTCATATTGTGGATTGATTGGAACATTTCCACAAAAGATCCTTCATATTGAATCACTGACTATTCTTGACATATCATTCAACTTAAATCTCCATGGTTCATTTCCAGAATTTCCATTAAATGGATCTATCCATTCTTTGTTGGTAGGTTTCACAAGCTTCTCGGGAGAAATTCCATGCACTATTGGTAACATGAGAAACTTATTTGAATTGGATCTTTCAAACTGTCGATTTTATGGAACACTTCCCAATTCAATGTCAAACCTTACACACCTTACCTACCTACAACTTTCTAATAATTATTTAAGTGGTACACTTCCTTCATCCCTTTTTACACTCCCATCCTTAGAGGAGATTTGGCTTCCATTCAACCAGTTTAGTAAATTTGACGAGTCGATAAATGTGTCTTCCTCTGTATTGAAAGCCCTTTCTTTAAAAAGCAATAATATATCTGGGCGTTTTCCTACTCCCATCTATCAGATCCATTCACTTATTTTCCTTGACATTGCCTTTAATAGGCTGAATGATTCACTACAACTAGATGGGATTTTGGAACTTAAAAATTTAATTAAACTAGACCTTTCATACAACAACATATCAATCAATGTGAATGTTACAAATGTAGGTCATATTTCCCTTCCTAACATTAGGTATATTAATTTGGCATCCTGCAACTTGAAAACTTTCCCTAACTTCTTGCTAAATCAATCAACATTGATCTTTCTTGACCTTTCACATAACCAAATTCAAGGAAAAATACCAAACTGGATTTGGGAACTACAATATCTTAAAGTCTTTAATATTTCTAACAATCTTCTCTCTCATTTGGAAGGACCTTCACAAAATATCACTTCACACTTGATGTTTCTTGATATTTCCTTCAACAACATTTATGGAACAATTTCACCAGCTTTAATCACAATGACTAGTACACTTTTGGCAATAAATTTAATGAATAACAATCTCAATGGTGTTATACCCGATATGTTTCCGACTTCTTGTGCCTTAAGCACTTTAAACTTCAATGGAAATCGGTTACATGGGCCAATTCCACAGTCTCTCTCTCACTGCTCATCATTAGAGGTATTAGACATCGGATCAAATCAACTTTTTGGTGGATTTCCATGCTTTTTGAAAAACATACCAACACTTAGTGTCTTGGTTTTGCGGAACAACAGATTGCATGGTTCCATAGAATGTTCACATTCCCTGGAAAATAAGCCTTGGAAAATGATTCAAATTGTGGACATAGCTTTCAATAATTTCAAAGGAAAACTTCCAGAAAAATTCTTCACAGCGTTGGAAAAAATGATGCATGATGAAGATCATGGTTTATCAGGATTCATTCATGCAGGGACAGTATACTATTTTTATCAGGATAGTGTGACAGTTTCAACTAAAGGTCAACAATTGGAGTTTGTTAAAATTCTAAAAATATTCACAGTCATTGATTTCTCATCCAATCATTTTGAAGGATCAATACCAGAAGTGCTGATGGACTTCACAGCGATTCATGTTCTCAACTTTTCAAATAATGCTCTCTCTGGTGAAATTCCATCGACTATTGGGAAACTAAAACAGTTAGAGTCATTGGACCTCTCAAACAATTCTTTGGTTGGTGAAATTCCTATGCAGATTGCAAGTTTATCATTCCTTTCTTGTTTGAACGTCTCCTCTAATCGTTTGGTGGGGAGGATTCCAACAGGTACCCAACTCCAGTCATTTCAAGCATCTGCATTTGAAGGAAATGATGGGCTATATGGTCCTCCATTGACTGAAAAACCAGATGTTACACAGGACATGCCACCACAACCATCATGTGGAAGACTAGTTTGTTCTACTAACCGAAAGCTTTTAAGTGTGGAATTGGGATTTGTTTTTGGGCTCGTAATCATCATTGGTCCTATCATGTTTCGGAAAAAATGGAGGGTGGGATATTGGAAACTTGTGGACAAAATTCTTTGTTCGATCTTTTCAAGAGTGTATCTTGAATATGCAACTAATAAAGGACAAACATACACAGTTTTAAGGTGGCGATATCGTTAG 2853 0.3575 MRITLLVSFFLCYYYCIYITHASPNCLEDQQSLLLQLKNNFTFLDRKQLYSPIIHEIISRSTKLRTWIKTTACCNWSGVTCDNKGRVIGLDLSGEHIIGGFNNSSSLFSLVHLQKLNLNDNYFNTSIPSGFSKLEKLTYLNLSMAGFLGQIPAEISQLTRLVTLDLSFISYSTKPQIPNLQKFIQNLTKIRKLYLDDISITSQGHEWSNALFPLRDLQELSLYNCDLSGPLDSSLTKLENLSIIILDGNNFSSPIPEKFANLKNLTTLRLSYCGLIGTFPQKILHIESLTILDISFNLNLHGSFPEFPLNGSIHSLLVGFTSFSGEIPCTIGNMRNLFELDLSNCRFYGTLPNSMSNLTHLTYLQLSNNYLSGTLPSSLFTLPSLEEIWLPFNQFSKFDESINVSSSVLKALSLKSNNISGRFPTPIYQIHSLIFLDIAFNRLNDSLQLDGILELKNLIKLDLSYNNISINVNVTNVGHISLPNIRYINLASCNLKTFPNFLLNQSTLIFLDLSHNQIQGKIPNWIWELQYLKVFNISNNLLSHLEGPSQNITSHLMFLDISFNNIYGTISPALITMTSTLLAINLMNNNLNGVIPDMFPTSCALSTLNFNGNRLHGPIPQSLSHCSSLEVLDIGSNQLFGGFPCFLKNIPTLSVLVLRNNRLHGSIECSHSLENKPWKMIQIVDIAFNNFKGKLPEKFFTALEKMMHDEDHGLSGFIHAGTVYYFYQDSVTVSTKGQQLEFVKILKIFTVIDFSSNHFEGSIPEVLMDFTAIHVLNFSNNALSGEIPSTIGKLKQLESLDLSNNSLVGEIPMQIASLSFLSCLNVSSNRLVGRIPTGTQLQSFQASAFEGNDGLYGPPLTEKPDVTQDMPPQPSCGRLVCSTNRKLLSVELGFVFGLVIIIGPIMFRKKWRVGYWKLVDKILCSIFSRVYLEYATNKGQTYTVLRWRYR* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0776 950 Gene3D Ribonuclease Inhibitor 551 866 IPR032675 -
Tpr4g0776 950 SMART LRR_typ_2 455 478 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 358 382 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 482 505 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 529 555 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 238 261 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 110 133 IPR003591 -
Tpr4g0776 950 SMART LRR_typ_2 794 822 IPR003591 -
Tpr4g0776 950 PRINTS Leucine-rich repeat signature 508 521 - -
Tpr4g0776 950 PRINTS Leucine-rich repeat signature 794 807 - -
Tpr4g0776 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 16 561 - -
Tpr4g0776 950 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 554 932 - -
Tpr4g0776 950 Pfam Leucine rich repeat N-terminal domain 28 82 IPR013210 -
Tpr4g0776 950 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 554 932 - -
Tpr4g0776 950 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 16 561 - -
Tpr4g0776 950 Gene3D Ribonuclease Inhibitor 405 550 IPR032675 -
Tpr4g0776 950 Gene3D Ribonuclease Inhibitor 26 206 IPR032675 -
Tpr4g0776 950 SUPERFAMILY L domain-like 65 396 - -
Tpr4g0776 950 Gene3D Ribonuclease Inhibitor 207 311 IPR032675 -
Tpr4g0776 950 Pfam Leucine rich repeat 335 395 IPR001611 GO:0005515
Tpr4g0776 950 SUPERFAMILY L domain-like 320 860 - -
Tpr4g0776 950 SUPERFAMILY L domain-like 390 570 - -
Tpr4g0776 950 Gene3D Ribonuclease Inhibitor 312 404 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0776 Tpr-Chr4 7279363 7282985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0776 26 911 Receptor kinase-like Gene Family AT1G47890 32.563 2.10e-132 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0776 - - mtr:MTR_4g019010 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0776 4 7279363 7282985 Tpr4g0776 4 7279363 7282985 ECH