Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0752 ATGACAGACACAAAGCACAAAACCGTCGTCACGTGGCGCAATATCCCCAACCTCAACTCCACCTCCCATGGCGTCGTTTCATCTAACCACCTCTTCAACGACGCCGTTTTCACTTTCACCGACGCAAACACCATTCGAACCAAATTCGCCACCATCTCCACATCACAAACTAAACCGAACAACGAATTCACTCCGACGCCGGCTCAGCTTCTAAATCACCCGCTCGCTGTTGTCGCACTTGTTCCCAAAGATGCTGCATTGTTTCTCGCCGGAGCTGTTGCCGGAGCTGCTGCTAAGACCGTCACTGCTCCACTCGATCGAATCAAGCTTCTCATGCAGACTCATGGAGTGCGAATTGGACAAGAAAGTGCGAAGAAGACAATTGGTTTTGTTGAGGCAATAACAATGATAGGGAAGGAAGAAGGTATTAGAGGTTACTGGAAGGGTAACCTACCGCAGGTTATTAGGGTTATACCTTATAGTGCCGTCCAGCTCTTTGCTTATGAACTTTATAAGAAAATATTCAAGGGAAAAAACAATGAGCTATCTGTTGTGGGAAGACTTGCAGCAGGTGCTTTTGCAGGCATGACATCAACTTTTATAACTTACCCTTTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGGTGCCGAACAATGACAGAGGTCGCCTTGAGCATGGTAAAAGAGGAAGGTTTTGCATCTTTCTACTATGGCCTTGGACCTTCTCTTATTGGAATAGCTCCATATATTGCAGTTAACTTTTGTGTTTTTGACTTACTAAAGAAGTCCTTGCCAGAGAAATATCAGAAGAGAACCGAAACATCTCTAGTCACCGCCGTGCTTTCAGCATCTCTTGCCACACTTACCTGCTATCCTCTGGATACAGTACGAAGACAGATGCAACTCAAGGGTACCCCTTATAAGACAGTATTAGACGCCATTTCAGGTATTGTGGCTCAAGATGGAGTTATTGGCTTGTACCGGGGATTTGTGCCCAATGCTTTAAAAAACCTTCCAAACAGCAGATATTTTTGCAGCATCAGGCTTACTACATATGATATTGTCAAACGACTTATTGCAGCTAGTGAGAAAGAGTTTCAAACAATTGCCGACGAAAACCGCAACAAACTAAAGAAACACCCATAG 1152 0.4462 MTDTKHKTVVTWRNIPNLNSTSHGVVSSNHLFNDAVFTFTDANTIRTKFATISTSQTKPNNEFTPTPAQLLNHPLAVVALVPKDAALFLAGAVAGAAAKTVTAPLDRIKLLMQTHGVRIGQESAKKTIGFVEAITMIGKEEGIRGYWKGNLPQVIRVIPYSAVQLFAYELYKKIFKGKNNELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGCRTMTEVALSMVKEEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLVTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVAQDGVIGLYRGFVPNALKNLPNSRYFCSIRLTTYDIVKRLIAASEKEFQTIADENRNKLKKHP* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0752 383 Gene3D Mitochondrial carrier domain 84 361 IPR023395 -
Tpr4g0752 383 PANTHER ADP/ATP CARRIER PROTEIN 7 373 - -
Tpr4g0752 383 PANTHER SOLUTE CARRIER FAMILY 25 7 373 - -
Tpr4g0752 383 SUPERFAMILY Mitochondrial carrier 85 343 IPR023395 -
Tpr4g0752 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 265 IPR018108 -
Tpr4g0752 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 360 IPR018108 -
Tpr4g0752 383 Pfam Mitochondrial carrier protein 181 268 IPR018108 -
Tpr4g0752 383 Pfam Mitochondrial carrier protein 87 178 IPR018108 -
Tpr4g0752 383 Pfam Mitochondrial carrier protein 276 362 IPR018108 -
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 87 100 IPR002067 GO:0055085
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 100 114 IPR002067 GO:0055085
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 149 169 IPR002067 GO:0055085
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085
Tpr4g0752 383 PRINTS Mitochondrial carrier protein signature 281 303 IPR002067 GO:0055085
Tpr4g0752 383 ProSiteProfiles Solute carrier (Solcar) repeat profile. 82 174 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0752 Tpr-Chr4 7024973 7028400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0752 5 378 Organic Solute Cotransporters AT3G51870 67.624 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0752 K14684 - gmx:100796878 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0752 4 7024973 7028400 Tpr4g0752 4 7024973 7028400 ECH