Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0741 ATGGTTGGAAAATCCATGACTGTCACTTCACGCGAAAAGCTCGCAAGTCTCATGCATTCAGCCAAATTGGCCATTGATATACCTTCAAAGCTTGAATTATTGCGTAAATTGAAGAATGAACTTCCTCAGGAAGACCCTGTTATTCTCACTGAGTTCCTCCCCCCGCTTTTCGATTTCCTCTCCGATCGTTTCAGTCCTGTTCGAAAATTCGTCACTGAGATGGTTGGTGAAATTGGATTGAATAACACTGAATTCTTGCCTGATATTGTGCCTATGTTGATTGATATCTTGGATGATGATACACCGGCGGTTGTTCGCCAAGCTATACTGTGTGGAATTGATTTGTTTAGTTCCACACTCGAGAAAATTGCGATTCAGGGTCTATATTCTAGTGAGTTAGAAAGTGCACTTGAATCTGCATGGGAGTGTATGCTTAAATTCAAAGACAAAGTATACTCAATAGCATTTCAAAATGGAAGGAGTGGAGCAAAGCTGCTGGCACTGAAGTTTGTTGAAGCAGTTATTCGTCTTTACACACTTGATCCTAATGGTTCCACAGAACCGACTTCTCATCACGGAAAGCCACCGGTATTTAATGTATCATGGCTGAGGCGGGATCATCCTGCACTTAACATCGGAGATTTGTCAATGGAAGCCAGTAATAGTTTGGGTCTCTTGCTTGATCAACTCAGGTTTCCAACTGTGAAGTCTCTTAGTAACTCAGTAATCATTGTGCTAATTAAAAGCCTTTCAGCCATTGCCATAGACAGGCCTGCATTCTATGGCCGTATCTTGCCAGTTTTGCTCAGTTTGGAACCCTCTAGCTCTGTTGTTAGTGGGGTCTGTGTGTCTGCAGCGCATCTTGCTCTAAAGAAGGCCTTTCTTACGTGCACGAAATGTACACATCCAAGTGCTGCCCCGTGGAGAGATCGTTTGGCTGGTGCCTTGAAGGAGATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCATCCAATCTCTGCAAGTAATGGAAGTATATTACAGAGAGAAGAGGATTATCACCCAGTTATCAAGGAAGAGGATGCTTCAGTAAGTTCGTTTGATTCAGGGCACATTAATCTGGGAAGAAAACGGCCAGGATCTCAAAATGGTGGTGATTTAGCTCAAGATGCAGATGGTCCTGGAAAACGTGTTAAAACAATAACCGACGTTTTGAAAAAACCTAAAAAGGAGTTAGATGAAAGTACTGCTAACATACAAGATGACACTCCTTCGTCTGTACCAGCATCTTCAAAAGGAGATGTGGATAATGGGCCTGTACAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAGGCTGTTGCGTCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTACTAGCGGAGGTGGTGATGGCAAATATGCGTTATCTACCTCCAAATTGCCCTAATGCTGAAGGAAATGATGAACAGTTGCATGACATTAGTATATTTGGTTCTCACGACAAGGCTAAGTATCCACAATCATTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTCCCACCCGTTGCTTCACTTCTTGATGCTCATCGATCAGTGTCCAATGATTTAGTGTCTCACGAGGAGGAAGAAATTTCTTCACCTGGAGTAGATAGTAGTGCCATGAATTCTGGCATGATTCTTTCATCTCAAAATGCACCATCGCCTACTGATTTTCCATCTTCGGATACTTATATACCTGGAGTAGAGAATGTCAGCACACCTCTGCCTGACATAGATGATGTTGGCAACTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAATTGATGCATTGTCAGAAACTTTGGCCCCTTCTTCATTGGTTTCCACTGATATGCAAATAGAAGATGCCAGTCAAGAGCAGGTTACGAGTTTGGATAATAGGTCACCCTTGAACTCAGTTCCATCAGTATCAGCAGATAAATCTGAAGAGCTGAGCCCAAAAGCAGTTGCTACAGATGTCAATAGCTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTGCCTGCGCGTCTAGTCTTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAAAAGGATCATTTGCAAATATCATGTTTTATGCGTATCATTGATGCATATAAGCAAATATCTCTAGCTGGAGGCTCAAAAGTTCGATTTTCGATACTTGCTTATTTAGGAGTCGAGTTTCCTTTGGAATTAGACCCGTGGAAATTGTTACAAAAGCATATTTTGATTGATTACTCTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGTGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATATGAGGCATTCTTCCTAGCAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCTTCGGATAAATCATTAAGCAAACTGCTCGGTGAATCTCCTTATTTGCCAAAATCAGTTTTAAAAATGTTAGAGAACATGTGTTCTCCTGGAAATGGGGATAAAGCTGAAAATGAATCAAACACATTGAATGCGGATAGAGTCACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTTTAAGGCCTCCTATTCGAGATGCTTGTTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAAGCAATACGCCTGGTAGCAAATAAACTTTATCCTTTATCACCAATTTCTAAGCAAATAGAAGATTTTGCAAAGGAAATGTTGTTCTCAGTGATGAGTGGTGATGCTTCTGAAACTACTGATGCTGAAGGGTCCATTGCTGATGCACAGAAGGGACCTGATATTGAAAAGCTTACAAATGAACCAGTATCTTTGAGTGGCAGTACTAAGGATGTCTCAGATAATCGACAATTAAGCACATCTGAAGGCACCTCATCACTTTCAATTTCTGAGGCTCAGAGAGGCATGTCACTGTATTTTGCCTTGTGCACAAAGAAACACTCTCTCTTTCGCGAAATATTTGTCATCTATAGAAGCACATCAAAAGCAGCAAAGCAGGCTATTCATCGTCAGATTCCCATACTAGTGCGTACATTGGGTTCATCTTCACATCTCCTTGAAATTATATCGGATCCCCCAAGTGGAAGTGAGGATCTCCTAATGCAGGTGTTGCGTACACTCACTGATGGTACGATCCCGTCTAAGGATTTGATATTTACTGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGGTTCTTATTCCAATATTGCCATTCCTACCGAAAGATGAGGTAATGCCGGTTTTTCCCAACATTGTTAACCTGCCTTCGGAGAAGTTCCAAGGAGCACTTGGTCGTCTATTGCAGGGATCATCACAATCTGGTCCAGTGCTTACACCAGCTGAAGTATTAATTGCTATTCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAAAAGGTAACTGATGCATGCAATGCTTGCTTTGAGCAACGACAAACTTTTACTCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTTCCTTTACTGTTCATGCGGACAGTATTACAAGCAATAGGTGCTTTTCCGACACTGGTGGACTTCATCATGGGTATTCTTGCTCGCCTTGTAAAGAAACAGATATGGAAGTACCCAAAGTTGTGGGTGGGATTCTTGAAGTGTTTGCAATTGACGAAACCTCAGTCATTTGGTGTTTTGCTTCAGCTACCTCCACCGCAATTGGAAGTTGCATTAAATAAAATTGCTGTACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCATCACTTCCCAGGTCTGTGCTGGTTGTTCTTGGCATTGTTTCCGATTCACAGGTTTCAAGTCAGCCACAAACTAGCCATACACAAACTAGCCAGCCACAAACTAGCCAACCACAAACTAGCCAACCACAAACTAGCCAAACACAAACAGGTGAGACAAGCAACTCAGATAAGGACACAATGACAGAAAAATCCAAAGAATCATCTACAGCGAGCTAA 4074 0.4202 MVGKSMTVTSREKLASLMHSAKLAIDIPSKLELLRKLKNELPQEDPVILTEFLPPLFDFLSDRFSPVRKFVTEMVGEIGLNNTEFLPDIVPMLIDILDDDTPAVVRQAILCGIDLFSSTLEKIAIQGLYSSELESALESAWECMLKFKDKVYSIAFQNGRSGAKLLALKFVEAVIRLYTLDPNGSTEPTSHHGKPPVFNVSWLRRDHPALNIGDLSMEASNSLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFYGRILPVLLSLEPSSSVVSGVCVSAAHLALKKAFLTCTKCTHPSAAPWRDRLAGALKEMQSEGKADQVFHPISASNGSILQREEDYHPVIKEEDASVSSFDSGHINLGRKRPGSQNGGDLAQDADGPGKRVKTITDVLKKPKKELDESTANIQDDTPSSVPASSKGDVDNGPVQQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRYLPPNCPNAEGNDEQLHDISIFGSHDKAKYPQSFVAGVMSLSSTFPPVASLLDAHRSVSNDLVSHEEEEISSPGVDSSAMNSGMILSSQNAPSPTDFPSSDTYIPGVENVSTPLPDIDDVGNLESGIPGLDSFGRIDALSETLAPSSLVSTDMQIEDASQEQVTSLDNRSPLNSVPSVSADKSEELSPKAVATDVNSLVSSTATSVVLPARLVLPKMIAPVVDLADEQKDHLQISCFMRIIDAYKQISLAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSSHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYEAFFLAVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKMLENMCSPGNGDKAENESNTLNADRVTQGLSAVWSLILLRPPIRDACLKIALQSAVHHLEEVRMKAIRLVANKLYPLSPISKQIEDFAKEMLFSVMSGDASETTDAEGSIADAQKGPDIEKLTNEPVSLSGSTKDVSDNRQLSTSEGTSSLSISEAQRGMSLYFALCTKKHSLFREIFVIYRSTSKAAKQAIHRQIPILVRTLGSSSHLLEIISDPPSGSEDLLMQVLRTLTDGTIPSKDLIFTVKRLHDSKLKDAEVLIPILPFLPKDEVMPVFPNIVNLPSEKFQGALGRLLQGSSQSGPVLTPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILARLVKKQIWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEVALNKIAVLKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQVSSQPQTSHTQTSQPQTSQPQTSQPQTSQTQTGETSNSDKDTMTEKSKESSTAS* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 938 984 - -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 368 427 - -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 627 660 - -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 385 410 - -
Tpr4g0741 1357 SUPERFAMILY ARM repeat 33 1227 IPR016024 -
Tpr4g0741 1357 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
Tpr4g0741 1357 ProSiteProfiles HEAT repeat profile. 89 128 IPR021133 -
Tpr4g0741 1357 Gene3D - 2 335 IPR011989 -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 1305 1341 - -
Tpr4g0741 1357 SUPERFAMILY ARM repeat 36 271 IPR016024 -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 411 427 - -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 627 656 - -
Tpr4g0741 1357 PANTHER SYMPLEKIN/PTA1-RELATED 1 1240 - -
Tpr4g0741 1357 Pfam Symplekin tight junction protein C terminal 1089 1267 IPR022075 -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 1305 1357 - -
Tpr4g0741 1357 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1240 - -
Tpr4g0741 1357 MobiDBLite consensus disorder prediction 959 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0741 Tpr-Chr4 6932850 6946703 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0741 K06100 - gmx:100779360 2018.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0741 4 6932850 6946703 Tpr4g0741 4 6932850 6946703 ECH