Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0678 ATGGCTCTTTCTTGTTCCAAAGTTTCAATTTTTTCACTCTCACCTATCATGGGTCATGGTGCCAAAAACCTCACTTTTTCTTCATCTTCTTTCAATCTTTCTAAAGAAGGTGATAGAAAGAAAGATTTGAAGATGTTTGCTGCTTCTGCAAATGCACCAACAACACTCACTGGTGTTATCTTTGAACCCTTTGAAGAAGTCAAGAAAGATATTCTTGCTGTTCCTATTGCTCATAATGTTTCTTTGGCTCGTCAGAATTTTCAAGATGAATCTGAATCTGCTATCAATGAACAGATTAATGTGGAATACAATGTTTCCTATGTGTACCACTCTTTGTTTGCATACTTTGACAGAGACAACGTAGCTCTCAAGGGACTTGCCAAGTTCTTTAAGGAATCTAGTGAAGAAGAAAGAGAGCATGCTGAAAAGCTTATCAAATATCAGAATATTCGTGGTGGAAGAGTGGTGCTGTACCCTATTGTGAGTCCTCCCTCAGAATTTGATCATGTGGAAAAGGGAGATGCATTGTATGCTATGGAATTAGCACTGTCTTTGGAGAAGTTAGTGAATGAGAAACTTCTGAATCTTCACAGTGTGGCTGATCGTAACAATGATCCTCAATTGGCCGACTTCATTGAGAGCGAGTTTTTGGATGAGCAGGTTCAATCGATTAAGAAGATATCAGAGTATGTGACACAACTGAGATTAGTCGGAAAGGGTCACGGTGTGTGGCACTTTGATCAAAGTCTCCTCCATTGA 759 0.3926 MALSCSKVSIFSLSPIMGHGAKNLTFSSSSFNLSKEGDRKKDLKMFAASANAPTTLTGVIFEPFEEVKKDILAVPIAHNVSLARQNFQDESESAINEQINVEYNVSYVYHSLFAYFDRDNVALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLYPIVSPPSEFDHVEKGDALYAMELALSLEKLVNEKLLNLHSVADRNNDPQLADFIESEFLDEQVQSIKKISEYVTQLRLVGKGHGVWHFDQSLLH* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0678 252 Pfam Ferritin-like domain 93 236 IPR008331 GO:0008199
Tpr4g0678 252 ProSitePatterns Ferritin iron-binding regions signature 2. 205 225 IPR014034 -
Tpr4g0678 252 ProSiteProfiles Ferritin-like diiron domain profile. 85 238 IPR009040 -
Tpr4g0678 252 PANTHER FERRITIN-2, CHLOROPLASTIC 1 252 - -
Tpr4g0678 252 CDD Euk_Ferritin 89 248 - -
Tpr4g0678 252 ProSitePatterns Ferritin iron-binding regions signature 1. 136 154 IPR014034 -
Tpr4g0678 252 PANTHER FERRITIN 1 252 IPR001519 GO:0006826|GO:0006879|GO:0008199
Tpr4g0678 252 Gene3D - 54 252 IPR012347 -
Tpr4g0678 252 SUPERFAMILY Ferritin-like 76 251 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0678 Tpr-Chr4 6262091 6265026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0678 K00522 - gmx:100778273 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0678 4 6262091 6265026 Tpr4g0678 4 6262091 6265026 ECH
Tpr6g2231 6 24220787 24223944 Tpr4g0678 4 6262091 6265026 PCT