Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0642 ATGAAGAAACAAAAGTTCATAGTAGAACAACAAAACTCAAACAACAACAACAACCTATTTGAATCACTCTCAGAGGAACTCATTTTCACAATCCTAGATTTCCTCGAACCAAATAACCAATCAAAACAAACCAAAAAATCATTCTCTTTATGTTGTAAATGGTTCCACGCGCTTGAATCAAAACACAGACGCGCTCTCCGTCCTTTACGCGCCGAACATATACCAACAATTCTCGCGCGTTATCCATCTATCCAAAACATCGATCTAACCTTGTGTTCGCGCGTGAACGACACGTCCTTAACTCTGATCGCCGGAGCGTATAAAAATACGCTCAGGCGTATCGATTTATCGAGGTCGAGGTTTTTTACGTGGAATGGAATATTGAATGTGGCAGTGAATTGTGTGAATTTGGTTGAGCTTGATTTGTCGAACGCGACGGAGTTGAGAGATGCAGCTATGGTTGGTGTTGCACGCGCTGTGAATTTGGAGAAACTTTGGTTGAATAGGTGTAAGTTGGTTACTGATATGGGAATTGGATGTATTGCTGTTGGTTGTAGGAAATTGAAGTTGATTAGTTTGAAATGGTGTGTTGGTGTTGCTGATTTAGGTGTTGATTTAATTGCTATTAAGTGTAAACAACTTTCTTCTATGGATCTCTCTTATTTGCCTATCACAGAGAAATGTCTCTCCTCGATCTTCAAATTGCAACATCTCGAAGATTTGGTCCTTGAAGGATGCTTTGGCGTTGGGGACGACAGCCTCAACAATTTAGTCGTCAACCAAGGATGCAAGACATTAAAGAAACTTGATATCTCAGGCTGTCAAAACATAAGTCATATCGGTCTATCAAAGCTAACAAGCATTTCTGGATGTGTCGAACAACTTGTATTAGCAGATGGTTCTCCGGTGACTCTTGCTTTTGCTGATAGTTTGAGTAAACTTTCGATGTTGCAATCGATCACATTAGACGGCTGCATTATTACCTCTGATGGATTGAAAGCCATTGGAAATTTGTGCATTTCACTTAAGGAACTCAGTTTAAGCAAATGTTCCGGAGTGACGGATGAAGCTCTTTCTTTCCTTGTGTCAAAACACAGAGATTTAAGGAAACTTGACATCACATGCTGCCGCAAAATAACCGATGTTTCAATTGCTAGCATTGCGAATTCGTGCAGAAGTCTCACTTCTCTCAAAATGGAGTCGTGTACGCTAGTTTCATCAGAAGCGTATATATTGATTGGACAGAAATGCCATTATCTTGAGGAACTTGATCTCACCGATAATGAAATTGATGATGAAGGCCTTGAATCCATGTCTCGTTGTTCGAGGCTCTCCAGCCTTAAACTAGGAATCTGCCTGAACATAACTGATAGAGGAGTTTCCTATGTTGGCATGTGTTGCTCAAAGATAAAGGAGCTTGATCTATACAGGTGCACAGGAGTAACAGATTTGGGAATCTCAGCAATTGCTTCTGGTTGCCCTGACCTAGAGATGATAAATACCGCATATTGCACTAGCATTACCGATAGGGCGTTATTCTGCTTATCAAAATGTGCAAATTTGCAGACACTCGAAATTCGTGGTTGTCTTCTTGTTACATCCATAGGTTTGGCATCTATTTCAATGAATTGCAAACAACTAAGCCGCCTAGACATAAAAAAGTGTTACAATATTGATGATAGTGGTATGATTCCACTAGCTCATTTCTCCCAAAATCTAAGACAGATAAACTTGTCGTATAGCTCAGTTACAGATGTAGGGCTTCTTTCACTTGCCGGTATCAGTTGCCTTCAAAACTTTACCCTACTTCACCTGCAAGGCTTGTCTCCACAAGGACTAGCGGCAGCGTTATTGGCATGTGGAGGGCTAACAAAAGCAAAGCTTCATGTTAAACTAAGATCTCTTTTACCCGAGCTGCTCATCAGACATATAGAAGCACGAGGGTGCGTGTTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCCAAGTGTTGGAAATTACAGTTAGAAGATCTGATACAATAG 2031 0.4072 MKKQKFIVEQQNSNNNNNLFESLSEELIFTILDFLEPNNQSKQTKKSFSLCCKWFHALESKHRRALRPLRAEHIPTILARYPSIQNIDLTLCSRVNDTSLTLIAGAYKNTLRRIDLSRSRFFTWNGILNVAVNCVNLVELDLSNATELRDAAMVGVARAVNLEKLWLNRCKLVTDMGIGCIAVGCRKLKLISLKWCVGVADLGVDLIAIKCKQLSSMDLSYLPITEKCLSSIFKLQHLEDLVLEGCFGVGDDSLNNLVVNQGCKTLKKLDISGCQNISHIGLSKLTSISGCVEQLVLADGSPVTLAFADSLSKLSMLQSITLDGCIITSDGLKAIGNLCISLKELSLSKCSGVTDEALSFLVSKHRDLRKLDITCCRKITDVSIASIANSCRSLTSLKMESCTLVSSEAYILIGQKCHYLEELDLTDNEIDDEGLESMSRCSRLSSLKLGICLNITDRGVSYVGMCCSKIKELDLYRCTGVTDLGISAIASGCPDLEMINTAYCTSITDRALFCLSKCANLQTLEIRGCLLVTSIGLASISMNCKQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLAGISCLQNFTLLHLQGLSPQGLAAALLACGGLTKAKLHVKLRSLLPELLIRHIEARGCVFEWRDKVFQAELDPKCWKLQLEDLIQ* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0642 676 Gene3D Ribonuclease Inhibitor 207 296 IPR032675 -
Tpr4g0642 676 Gene3D Ribonuclease Inhibitor 297 411 IPR032675 -
Tpr4g0642 676 Pfam Leucine Rich repeat 416 438 IPR001611 GO:0005515
Tpr4g0642 676 Pfam Leucine Rich repeat 263 285 IPR001611 GO:0005515
Tpr4g0642 676 Pfam Leucine Rich repeat 365 388 IPR001611 GO:0005515
Tpr4g0642 676 Pfam Leucine Rich repeat 467 490 IPR001611 GO:0005515
Tpr4g0642 676 Pfam Leucine Rich repeat 570 592 IPR001611 GO:0005515
Tpr4g0642 676 Gene3D Ribonuclease Inhibitor 412 661 IPR032675 -
Tpr4g0642 676 SUPERFAMILY RNI-like 467 608 - -
Tpr4g0642 676 PANTHER UNCHARACTERIZED 12 619 - -
Tpr4g0642 676 Gene3D Ribonuclease Inhibitor 13 206 IPR032675 -
Tpr4g0642 676 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 12 619 - -
Tpr4g0642 676 SUPERFAMILY RNI-like 262 510 - -
Tpr4g0642 676 SUPERFAMILY RNI-like 73 286 - -
Tpr4g0642 676 SMART LRR_CC_2 493 518 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 263 288 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 417 441 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 544 569 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 314 338 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 108 133 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 570 594 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 442 466 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 185 210 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 391 416 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 467 492 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 339 364 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 81 106 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 235 260 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 365 390 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 519 543 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 161 184 IPR006553 -
Tpr4g0642 676 SMART LRR_CC_2 134 159 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0642 K10268 - gmx:100803617 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0642 4 5965789 5971167 Tpr4g0642 4 5965789 5971167 ECH