Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0637 ATGCGAGGAAGACAACGAGTAGCATCAAGGGAATTCATAACTGCGTATGATATTAAAGATGAAAATCCAGCTTCAGTGCGTGTACCGGGTCCCAGGCCTTGTTGGCGGCGCTCTTTGCGGCATGTAATAGTGGCTTCTCTTTCCTCATTCTTATATGGCTATCATGTTGGAGTAGTTAATGAAACCTTAGAGAGCATTTCTATAGATCTAGGCTTTAGCGGAAATACATTGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTCTATTCAGTGGGTGGATCGCAGATGGGGTTGGGCGTAGAAGAAGTTTCCAGTTGTGTGCTTTGCCTATGATCATTGGAGCAATAATGAGTGCAACATCAACATCCCTCTGGGGCATGCTTTTAGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCTGAGGTCTCACCTCCAGCTGTGCGCGGTACTTTTGGGGGCTTAACGCAAATTGCAACATGTCTTGGACTCATGGGGTCTCTCTTTATAGGAATCCCAGCCAAAGAAATAGTCGGTTGGTGGCGGATTTGTTTCTGGGTATCTGTCATCCCCTCTACTGCTCTTGCTCTTTTCATGGAGATCTGTGCAGAGAGTCCTTATTGGCTTTTCAAGAGAGGAAGAACCATTGAAGCTGAAGCTGAATTTGAGAAGCTGTTAGGAGGACTACATGTGAAACCTGCAATGAATGACCTTACAAAATCTGACAGAGGTGATGAGTCTAGCGGAATAAAAATCTCAGAATTATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCTACGCTTTTTGCTTTGCAGCAACTGTCCGGCATAAATGCTGTTTTCTATTTCTCTTCAGCTGTCTTTGAAAGCTTTGGTGTACCATCTAAGTTGGGAAACACGTGTGTTGGAATTTGCAATTTATTGGGTTCGATTATTTCAATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTTGGTAGCTTTTTAGGCATGGCAGTAACAATGGGTCTACAAGTCATAGCTGCAAGTCCTTATGCATCGATATTTGGAGGGATGTATCTATCAGTGGGCGGCATGTTGCTGTATGTGCTATCATTTGCTCTCGGTGCTGGTCCGGTTCCTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGAGCCAAGGCAATGGCAATATGCTTGGCTGTACATTGGGTGATAAATTTCTTCGTCGGTCTATTATTTTTGCGCATGCTGGAACAACTGGGGGCACAACTCTTGTACAGTATTTTTGGTTCATTTTGTTTGTTGGCTGTGCTTTTTGTGAAGAAATATGTTCTGGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACAAGAAGCAACCTAA 1443 0.4366 MRGRQRVASREFITAYDIKDENPASVRVPGPRPCWRRSLRHVIVASLSSFLYGYHVGVVNETLESISIDLGFSGNTLAEGLVVSICLGGAFIGSLFSGWIADGVGRRRSFQLCALPMIIGAIMSATSTSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTFGGLTQIATCLGLMGSLFIGIPAKEIVGWWRICFWVSVIPSTALALFMEICAESPYWLFKRGRTIEAEAEFEKLLGGLHVKPAMNDLTKSDRGDESSGIKISELLFGCHARVMFIGSTLFALQQLSGINAVFYFSSAVFESFGVPSKLGNTCVGICNLLGSIISMILMDKLGRKVLLLGSFLGMAVTMGLQVIAASPYASIFGGMYLSVGGMLLYVLSFALGAGPVPCLLMSEILPGKIRAKAMAICLAVHWVINFFVGLLFLRMLEQLGAQLLYSIFGSFCLLAVLFVKKYVLETKGKSLQEIEIALLAQEAT* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0637 480 CDD MFS_GLUT_like 44 461 - -
Tpr4g0637 480 ProSitePatterns Sugar transport proteins signature 1. 330 346 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr4g0637 480 PANTHER - 5 477 IPR045263 -
Tpr4g0637 480 PRINTS Sugar transporter signature 49 59 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 PRINTS Sugar transporter signature 134 153 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 PRINTS Sugar transporter signature 289 299 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 PRINTS Sugar transporter signature 375 396 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 PRINTS Sugar transporter signature 398 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 Pfam Sugar (and other) transporter 42 472 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr4g0637 480 TIGRFAM SP: MFS transporter, sugar porter (SP) family 38 470 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr4g0637 480 Gene3D MFS general substrate transporter like domains 36 475 IPR036259 -
Tpr4g0637 480 ProSitePatterns Sugar transport proteins signature 1. 97 114 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr4g0637 480 SUPERFAMILY MFS general substrate transporter 27 471 IPR036259 -
Tpr4g0637 480 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 5 477 - -
Tpr4g0637 480 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 463 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0637 Tpr-Chr4 5912449 5920316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0637 5 419 Organic Solute Cotransporters AT1G67300 65.877 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0637 - - aprc:113857086 831.632