LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g0633	ATGGTTAGAGCACTAGATCAAGAACAGGAAAATCATAAGTCCAAATTATTCCATTTCAAAGGAATGTTTGAGAATGCGGCGAGGCACTCGAAAAGTTTAAGCGTTGAAAGTGCTAGCACATTAGATCCTACAACAGAAGATGATAATGTTTCATCAAGAAGTCAAGGATCAAAACCTGTACATCATGATCCTGAAAGAGCTCATCCTAACAAGCCAAGAACAATAAAGGAGGAGATTGTAGCCAAAGAAGCCAAAGAGAAACATGTGCAAGAAATCGAACAGATGAAGGAGAGATTTGCTAAACTACTATTGGGAGAGGATATGTCTGGTGGAGGGAAAGGTGTTTCTTCAGCTTTGGCGTTGTCAAATGCATTAACAAATCTTGCTGCTTCTGTTTTCGGTGAACAAAGGCGGCTAGAGCCAATGCCGCCGGAAAGGAAAGCCAGATGGAGAAAAGAAATCGACTGGCTTCTTTCGGTCACTGATTACGTCGTTGAAATGGTTCCTACACAACAAAAAGGCAAGGATGGTTCAAGCATGGAGATTATGACAACACGGCAACGAACCGATCTTCATATGAATATCCCTGCCTTGAGAAAGCTTGATACAATGCTTATTGATTGTCTAGATAACTTCAGAGACCAAAACGAATTCTATTACGTATCGAAAGATGCTGATGATAAAGACACAAAAGGTAAAAATGATGACAAGTGGTGGTTACCTACACCTAAAGTACCTGTAGATGGTTTGTCTGATGCAGCAAGAAGATTTCTACAGTATCAGAAAGATTGTGTGAATCAAGTACTTAAAGCAGCAATGGCTATAAATGCTCAAACTCTACAAGAAATGGAGATCCCTGAAAGCTATATTGAAGCCCTACCTAAGAATGGAAGAGCAAGTCTAGGGGACATGATCTACCGGAGCATTACCGATGATTTTTTTGATCCCGATCAGTTCTTAGCAACAGTTGACATGTCATCAGAACACAAGATTGTTGATCTCAAGAACAGAATTGAGGCATCAATAGTGATTTGGAAAAGGAAGATGAACCAAAAAGATAACAAATCAGCATGGGGTTCTGCTGTGAGTATTGAGAAGAGAGAACTCTTCGAAGAGAGAGCAGAAACCATCTTAGTTCTCTTGAAGCATAGATTTCCAGGGCTTCCCCAATCTTCATTGGATATTAGCAAAATCCAATTCAACCGGGATGTAGGGCAAGCTGTTCTTGAAAGTTATTCAAGAATATTGGAAAGTTTGGCCTTTACGGTGTTATCAAGAATCGAAGATGTACTTCATGCAGATTGCCAAACACAAAATCCATTACAAGGAAGAAGAAATAGTGCGAGAAATCCAGTTCCAAAGCCAGAAAAGTGTCCGACTCCTCCAAGAGAAGAAGTAGACAAGATCAGTGCAGAAACTCCTTGTTCGATGACACTATCAGATTTCATGGGTTGGAGCAGTGATCAAGGTGAATCAGACCCTAATAAGAAGGATTCTTCTGCAGTTTCAGATGATACGGACAAAGATATTGAAAGCGCAAAGCTTCAAAAACTTCCACTCATATCGACCGATAAGAAATTGTCATACGTTGAAAACATAGGAGGTATGAGAAGTCCAACATCACGCCATTGA	1632	0.402	MVRALDQEQENHKSKLFHFKGMFENAARHSKSLSVESASTLDPTTEDDNVSSRSQGSKPVHHDPERAHPNKPRTIKEEIVAKEAKEKHVQEIEQMKERFAKLLLGEDMSGGGKGVSSALALSNALTNLAASVFGEQRRLEPMPPERKARWRKEIDWLLSVTDYVVEMVPTQQKGKDGSSMEIMTTRQRTDLHMNIPALRKLDTMLIDCLDNFRDQNEFYYVSKDADDKDTKGKNDDKWWLPTPKVPVDGLSDAARRFLQYQKDCVNQVLKAAMAINAQTLQEMEIPESYIEALPKNGRASLGDMIYRSITDDFFDPDQFLATVDMSSEHKIVDLKNRIEASIVIWKRKMNQKDNKSAWGSAVSIEKRELFEERAETILVLLKHRFPGLPQSSLDISKIQFNRDVGQAVLESYSRILESLAFTVLSRIEDVLHADCQTQNPLQGRRNSARNPVPKPEKCPTPPREEVDKISAETPCSMTLSDFMGWSSDQGESDPNKKDSSAVSDDTDKDIESAKLQKLPLISTDKKLSYVENIGGMRSPTSRH*	544

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g0633	543	Gene3D	PRONE domain, subdomain 1	96	434	-	-
	Tpr4g0633	543	Gene3D	PRONE domain, subdomain 2	284	400	-	-
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	438	471	-	-
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	30	57	-	-
	Tpr4g0633	543	ProSiteProfiles	PRONE domain profile.	82	444	IPR005512	GO:0005085
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	483	512	-	-
	Tpr4g0633	543	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	91	438	IPR005512	GO:0005085
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	58	76	-	-
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	30	76	-	-
	Tpr4g0633	543	PANTHER	RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR	90	543	-	-
	Tpr4g0633	543	MobiDBLite	consensus disorder prediction	491	512	-	-
	Tpr4g0633	543	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	90	543	IPR038937	GO:0005085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g0633	Tpr-Chr4	5892411	5897468	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g0633	-		-	gmx:100777496	801.201