Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0627 ATGAGTATGCCGAAACCTAATCAAGTAGCAGTTAGAGACCTCGTTGAAGAAGCTAAGAAACGAATTGTGATTCTCATCGTTTGCGTTGTTGGACTCTCCTATCTAATGTCATTGACAAGCTCCTCAGTTTGGGTCAACTTGCCTGCTGCAGCCTCCTTACTTATCATTTTCCGCTATTTATCACTGGATTATGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAATCAGGCTCCACCAGTGTTCAGTCTTCAAAGAAGCCTACCGAAAATCCTAAAGCAGTTGCGAAGTTTGAGTGGCGAGCAAAAGTTAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGACATCTGATTTCTGAGTGGGTGACAGACCTTTGGTACTCTCGCTTAACACCAGACAAAGAGGGTCCCGAGGAGTTGGTGCAAATAGTTAATGGTGTTCTTGGTGAAATTTCAGGACGCATGAGAAATATAAATCTGATTGATTTTTTGATAAGGGATCTTGTTAATCTCATTTGCACTCACTTGGAGCTGTTTCGTGCTGCTATCTCAAAGATTGAAAAACAACACACAGATTCATTAACAATTGAAAGACGGGATACAGAGCTAAAAATTGTGTTGGCAGCAGAAGACAAATTGCATCCTGCTTTATTCTCTTCTGAAGCTGAGCACAAGGTTTTGCAGCATCTGATGAATGGTCTTATGTCTGTCACTTTCAAGTCTGAGGATCTGCAGTGTTCTTTCTTTCGATATATTGTCAGGGAGCTTCTTGCATGTGCTGTAATGCGACCTGTCCTAAATTTAGCCAATCCAAGATTTATTAACGAAAGAATTGAATCTGTGGTAATTAATAAGACCAAGGCTAACAAGGGGGTTGATGCAGCTCAAGGGCTATCCCCCATTAAAGAAGATGAGTCACAAACTTCATCTGATCATTTTTCCAAGTGTTTAGATCCTTCTGCTACTGGTGTTGAGCTTACACAGCTAAAAAATGGTCAGTCCAGAAATCCAGAGCCATCTACAGAAAGAAATGTTTCTGATAACCTTTCTAGAGATCCGTTGCTTTCAATGGATACTCGATCTTCCCGTTCATGGAACTCTTTGCCTGGAAACTCACAAAGTAATGGTGACCAAGGTATTCAACGATATCGCTCAGGAGGAGAATGGGGAGATATTTTAGATGTCGTCTCTCGAAGAAAGACCCAAACTCTTGCACCAGAACATTTTGAGAATGTTTGGGCAAAGGGCAAAAATTACCAGAAAAAGGATGGAGAGAACCAGTCAAATGAGCGAGCCCCACAACATCCCTCAACAGGAAAATCACTCAAGATAGATCATATGAAGGCAACATCTGGACCCAAAGAACACGATACTAGATTGAAGCTTAATACCTCTAAGGGAGGCCACATTAATTCTGGATACAGCAGTCAATTCACTGTTGAAAATGCATCCGTTCACACAGACAAGAATGGATCAACTTGTTCTTCAGTTACCTCATATAAAGATGATGAGGACAGCCACATTAATAGGAATATGAGTGAATCAGAGAGCAATACTTCTTATACTTCTGAAGATGATGAAACTAGTACTGTTACTGGTCTTGATTCCCCTGTAACTAAGGTTTGGGATGGAAAAAGTATCAGAAACCAGGCTGTTTCTTATGTTCATCACCCACTTGAAAATGTTGATAGCCACAGTACAAAGAAAAGGAATAAGAACCATTCCCGTTATCCGAGATCATTCAGAACACAATCTGGCAGTAAAAGGTCCCGGTCAAGCGATTTAAAGACAAATATGTGGCAGGAAGTTGAGAGGTCAAGCTTTTTATCTGGTGATGGTCGAGACATACTTGGCTCTCCAAAACCACCTGTGAATTCTGACGGATCCTCTGATGATGCTGATTTTGAAAGTTTGGGTAGAATTTATAGCGGAGCAGCTGCCTCTTCGTCCTCAATTTCTAAATCAGAATCTTGCAGTTTGGCTGTTAATCCCCTGAGAAGTTCTTCTGCCGTAGATTCCTTTTACAAGTTGAGATGTGAGGTCTTGGGTGCAAATATTGTCAAGAGTGGTTCAAGAACATTTGCCGTTTATTCCATATCTGTTACAGATGTAAATAATAACAGTTGGTCAATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTGCATCGGCGCCTGAAAGAGTTCTCCGAGTATAATCTTCATTTGCCACCTAAACATTTTCTGTCAACTGGTTTAGATGTAGCAACCATTCAAGAACGGTGTGAATTGCTTGATAAATATTTGAAGAAACTTATGGAGCTACCTACAGTTTCAGAATCAATTGAGTTATGGGACTTTTTGAGTGTTGACTCTCAGACGTACGTATTCTCAAATTCTTTTTCTATAATGGAAACATTACCAGTTGGCCTGGATGCTAAGTCGTCTGAGAAGACTAAAATCAGTTCCAATGTTTCTGCACCCGGAAGTGATTCTTTTTTGCAAACAAAAAATCATGCCGTGGCTAATGGATCGAGGCCAACAGTAAATAGCACGCCTCTTTCTCTACCATCAAAAAAGAATACACGGGAATCAAGACAGTCATTTGACAATTCTGGAAGCAATGCAGATATTCTACCAAGGAAGAGTGCACATTCTCCCAATAACTTGCAGAAGTCAGTGAAAGGAAGAGATAGTTCAAACGAGCTCTCTGATGTGCAGCATGATACTGCTGAAACTCTTCCAACAGAGTGGGTGCCACCTAATTTAAGTGTACCCATATTGGATCTGGTTGATGTTATCTTCCAGCTGCAAGATGGTGGATGGATTAGGAGGCAGGCTTTCTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGATGCCTTAGATGATTGGTTGTTAGAGAAAATTCTGCTTCTCCGAAAGGGATCAGTGATTGCTTCAGGGGTCACACGAGTTGAGCAAATACTCTGGCCTGATGGAATTTTCTTAACCAAGCATCCAAATCGACGACCACCTACCGGTCCATCTCAGAGTTCACCTAATGGCCATCAATCTACACCAGTATCTACTCCAAGGATGGATGATGAGCAGCAACGAGAGGCAGATCGGCGCGCAAAGTTTGTATATGAGCTAATGATCGATCATGCACCACCAGCAATTGTAGGTCTTGTCGGAAAGAAGGAGTACGAACAATGTGCAAGGGATCTTTATTTTTTTCTTCAGTCATCTGTTTGCTTGAAGCTGCTGGCTTTTGATCTCCTGGAGATGCTGCTTTTGTCGGCATTTCCCGAACTTGATGATGTATTCAAGCAGGTGCATGAAGAAAAACATAGATTTGGTGAGCTCGTCAAGTAA 3345 0.4129 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPAAASLLIIFRYLSLDYEMKRKAAAYNNKSGSTSVQSSKKPTENPKAVAKFEWRAKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDKEGPEELVQIVNGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRAAISKIEKQHTDSLTIERRDTELKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLMSVTFKSEDLQCSFFRYIVRELLACAVMRPVLNLANPRFINERIESVVINKTKANKGVDAAQGLSPIKEDESQTSSDHFSKCLDPSATGVELTQLKNGQSRNPEPSTERNVSDNLSRDPLLSMDTRSSRSWNSLPGNSQSNGDQGIQRYRSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPSTGKSLKIDHMKATSGPKEHDTRLKLNTSKGGHINSGYSSQFTVENASVHTDKNGSTCSSVTSYKDDEDSHINRNMSESESNTSYTSEDDETSTVTGLDSPVTKVWDGKSIRNQAVSYVHHPLENVDSHSTKKRNKNHSRYPRSFRTQSGSKRSRSSDLKTNMWQEVERSSFLSGDGRDILGSPKPPVNSDGSSDDADFESLGRIYSGAAASSSSISKSESCSLAVNPLRSSSAVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFSEYNLHLPPKHFLSTGLDVATIQERCELLDKYLKKLMELPTVSESIELWDFLSVDSQTYVFSNSFSIMETLPVGLDAKSSEKTKISSNVSAPGSDSFLQTKNHAVANGSRPTVNSTPLSLPSKKNTRESRQSFDNSGSNADILPRKSAHSPNNLQKSVKGRDSSNELSDVQHDTAETLPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDALDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLTKHPNRRPPTGPSQSSPNGHQSTPVSTPRMDDEQQREADRRAKFVYELMIDHAPPAIVGLVGKKEYEQCARDLYFFLQSSVCLKLLAFDLLEMLLLSAFPELDDVFKQVHEEKHRFGELVK* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 835 902 - -
Tpr4g0627 1114 Pfam PX domain 709 786 IPR001683 GO:0035091
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 835 892 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 490 538 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 332 355 - -
Tpr4g0627 1114 Pfam Sorting nexin C terminal 937 1073 IPR013937 -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 561 600 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 421 447 - -
Tpr4g0627 1114 Gene3D - 678 794 IPR036871 GO:0035091
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 581 600 - -
Tpr4g0627 1114 Pfam PXA domain 106 283 IPR003114 -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 1000 1022 - -
Tpr4g0627 1114 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 7 1112 - -
Tpr4g0627 1114 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Tpr4g0627 1114 PANTHER PX SERINE/THREONINE KINASE PXK 7 1112 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 614 633 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 515 538 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 297 316 - -
Tpr4g0627 1114 ProSiteProfiles PX domain profile. 678 790 IPR001683 GO:0035091
Tpr4g0627 1114 SMART PX_2 682 786 IPR001683 GO:0035091
Tpr4g0627 1114 SMART PXA_3 110 289 IPR003114 -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 361 380 - -
Tpr4g0627 1114 MobiDBLite consensus disorder prediction 999 1029 - -
Tpr4g0627 1114 SUPERFAMILY PX domain 679 787 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0627 Tpr-Chr4 5852942 5862364 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0627 K17925 - gmx:100778731 1697.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0627 4 5852942 5862364 Tpr4g0627 4 5852942 5862364 ECH