Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0616 ATGATACAGATGTTTCGTTGGCTATTGAAGCCTAAATTCTATTCAAAATGTATATATTATGTAAAGTGTATAAAGACTCGGTTAGAGATGATGGAGAAAAGGAGAAGAGCTATTCAGAAGTTTACAAAGAGTGACATCGTTGAACTTCTTAGGAGAAGACTTGATTATGATGCATATAAAAGGACTGAATGGTTTCTGTTCGAGGAAAAAAAATTATCATGCTATGAATTCATTGAAAAGTTTATTGGATGCATATCGGATCATCTTGAAGACATAATTAAACAGAGTGATTGCCCTGAGGAATGCAAGGAAGCAATACCATCATTGATGTATGCTACAGCAAGACTTTCTGATCTACCAGAATTGCGTGACCTCAGAACATTGTTTACAGAAAAATATGGAAATTCTCTTGAACCATACATAAATAAAGAGTTTGTTGAGAGATTGAGAAGAGACCCTCACACAAGAGAAATGAAGATTAAGTTATTATATGATATTGCACAAGAGTTCTCTATAGATTGGGATGCAAAGGCTTTGAAGTTAAGACTTTATGCACATCCATCACTATTTGAAGGGAGGCCTAATGGAAGTGGAGGAGAACACAAAGATAAAAGTGACTTCATTAAATCCAAAGAAAATGAGGCAAGGCACCAAAACAGTAGTGATGATGAAACAACAAGCACAGACACAGACACCGACAGATCGTCATCACATTATCATGGAAGAAAAGCAAGTTCAAGTTCATTTGGAAGCATATCTGAAGATGATGATGATGATGAACAAGTAAAAGAAATCAAGAAGCCAAATTCCTTTTGGCACATTCCACCTCCTTACATCAAACAACAAAAGACTAATAACAAAGGTAGTGAAAGTAATGGTCCAAACAAAACAACAGATTCTCAAGAAAAGCAGAAAGACATTGATTCAAGTGAAATGAAACCAACAATTTCAGTGGAAACAACATCATCATCAAAAGGGAATGCACGAATGTGGGGTGGTGGATGGCATGATTACGATGATTTCATTGCTCGTTTTAAAGCTTTCACAGGAAGGTCATAG 1059 0.3579 MIQMFRWLLKPKFYSKCIYYVKCIKTRLEMMEKRRRAIQKFTKSDIVELLRRRLDYDAYKRTEWFLFEEKKLSCYEFIEKFIGCISDHLEDIIKQSDCPEECKEAIPSLMYATARLSDLPELRDLRTLFTEKYGNSLEPYINKEFVERLRRDPHTREMKIKLLYDIAQEFSIDWDAKALKLRLYAHPSLFEGRPNGSGGEHKDKSDFIKSKENEARHQNSSDDETTSTDTDTDRSSSHYHGRKASSSSFGSISEDDDDDEQVKEIKKPNSFWHIPPPYIKQQKTNNKGSESNGPNKTTDSQEKQKDIDSSEMKPTISVETTSSSKGNARMWGGGWHDYDDFIARFKAFTGRS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0616 352 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 12 311 - -
Tpr4g0616 352 Pfam Regulator of Vps4 activity in the MVB pathway 21 173 IPR005061 GO:0015031
Tpr4g0616 352 PANTHER IST1 FAMILY MEMBER 12 311 IPR005061 GO:0015031
Tpr4g0616 352 MobiDBLite consensus disorder prediction 279 298 - -
Tpr4g0616 352 MobiDBLite consensus disorder prediction 313 327 - -
Tpr4g0616 352 MobiDBLite consensus disorder prediction 211 240 - -
Tpr4g0616 352 MobiDBLite consensus disorder prediction 211 327 - -
Tpr4g0616 352 Gene3D - 9 180 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0616 Tpr-Chr4 5763250 5770741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0616 - - gmx:102665874 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0616 4 5763250 5770741 Tpr4g0616 4 5763250 5770741 ECH