Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0595 ATGGAGCTTATTTCGGGTCTACCCGAAGATGTGGCCCGAGACTGTTTACTTCGGGTTTCATACCAACAGTTTCCAGCTGTGGCAGCGGTTTGTAAAGGGTGGAAGACGGAGATACATACGCCGGAGTTTCACCGTCAACGGCGGAGAACAGGACAAGCTCAGAAAGTTCTAGTTATGGTTCAAGCAAAAGTTGAACCGGAGAAAACAGAAACCGGTTCGACAAAAAGATTAACAAACCCGGTTTATAAGCTCAGTGTTTTTGAACCGGAAACGGGTTTTTGGAGTGAATTACCGGCTCCACCCGGTTATGGTTCAGGGTTACCGGTGATGTGTCAGTTAGCATGTGTTGGTTATGATCTTGTTGTATTGGGTGGGTTGGATACATATACATGGAAAGCATCAAATTCAGTGTTTGTTTATAATTTCTTGTCGGCCAAATGGCGCAGTGGGACCCACATGCCTGGTGGACCTCGCACATTTTTCGCTTGTTCATCGGATAACTACCGGACAATTTTTGTAGCCGGTGGTCATGACGATGAGAAAAATGCGCTGAGGTCTGCGTTGGCATATGATGTGGTGGAAGATAAATGGGTTGAATTGCCAAATATGTCGTCGGAGCGTGACGAGTGTAAGGCGGTGTTCCGCCGTGGGAGGTTTATTGTAGTCGGTGGTTACACGACGGAGAATCAAGGAAGGTTTGAGAGAAGTGCGGAAGCTTTTGATTTTATGACGTGGAAGTGGGGTCATGTTGAGGAAGAGTTTTTGGATTGTGCCACGTGTCCTATGACATTGGTGGACGGTGGTGATGATGATGAGAGTGTTTATATGTGTTACGGCGGAGATTTAGTTGCGATGCGGGGTCACACGTGGCAGAGGATGGGTAAGGTTCCTGATGAGATACGCAACGTGGCGTATGTCGGAGCGTTTGATGGAGTTGTGGTTGTGATTGGTTCAAGTGGCTATGGTGAAGTGCATATGGGTTATGTTTTTGATGTGAAAAAGAGTAATAATAATTGGAGGAAATTGGATTGTCCAGATGGGTTTAAGGGACATGTTCAAACCGGTTGTGTTTTAGAAATTTAG 1083 0.4608 MELISGLPEDVARDCLLRVSYQQFPAVAAVCKGWKTEIHTPEFHRQRRRTGQAQKVLVMVQAKVEPEKTETGSTKRLTNPVYKLSVFEPETGFWSELPAPPGYGSGLPVMCQLACVGYDLVVLGGLDTYTWKASNSVFVYNFLSAKWRSGTHMPGGPRTFFACSSDNYRTIFVAGGHDDEKNALRSALAYDVVEDKWVELPNMSSERDECKAVFRRGRFIVVGGYTTENQGRFERSAEAFDFMTWKWGHVEEEFLDCATCPMTLVDGGDDDESVYMCYGGDLVAMRGHTWQRMGKVPDEIRNVAYVGAFDGVVVVIGSSGYGEVHMGYVFDVKKSNNNWRKLDCPDGFKGHVQTGCVLEI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0595 360 Gene3D - 11 286 IPR015915 GO:0005515
Tpr4g0595 360 SUPERFAMILY F-box domain 3 49 IPR036047 GO:0005515
Tpr4g0595 360 Pfam Kelch motif 170 204 IPR006652 GO:0005515
Tpr4g0595 360 Pfam F-box domain 4 45 IPR001810 GO:0005515
Tpr4g0595 360 Pfam Kelch motif 110 158 - -
Tpr4g0595 360 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 360 - -
Tpr4g0595 360 PANTHER OS02G0208700 PROTEIN 1 360 IPR044595 GO:0080037|GO:2000762
Tpr4g0595 360 SUPERFAMILY Kelch motif 79 335 IPR015915 GO:0005515
Tpr4g0595 360 SMART kelc_smart 170 217 IPR006652 GO:0005515
Tpr4g0595 360 SMART kelc_smart 119 167 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0595 Tpr-Chr4 5588760 5590381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0595 - - gmx:100796602 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0595 4 5588760 5590381 Tpr4g0595 4 5588760 5590381 ECH
Tpr7g4952 7 57297847 57299681 Tpr4g0595 4 5588760 5590381 PCT