Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0579 ATGGATAGAGGTGATATATACAAATCAAGTAGTAGTTTGAGAGGGAATAGTTCTACGTTTTTTTCGAGATCCTCACGGCGTGAAGAAGACGACGATGAAGAAGCTTTGAAATGGGCTGCAATTGAAAGACTTCCAACTTACAATCGTTTAAAGAAAGGGTTGTTGGCCACATCACATGGAGTTTCCAATGAGATTATTGATGTAACTAAACTTGGATTGCAAGAAAGGCAGAAACTATTGAATAGGTTGATTAATGTTGCTGAAGAGGACAATGAGATGTTTTTGTTGAAGCTAAAGGAAAGAATTGATAGAGTTGGGATTGACATTCCAACAATTGAAGTTCGTTATGAGCACCTAACTGTTGAGGCAGAGGCTTATGTGGGAAGTAGAGCTTTGCCTACTTTCACAAACTTCACAATTGGCGCGGTGGAGGGTTTACTTACTTTGCTGCATATTCTATCACGCAAAAAGAAACATGTGACTATCCTTAAAGATGTTAGTGGAATCGTCAAACCTCGTAGGATGACGCTGCTTCTTGGTCCTCCAAGTTCTGGAAAGACCACACTTCTGTTGGCCTTAACAGGAAAACTTGATAAAACTCTCAAGGAGTCTGGTAGAGTGACTTATAATGGATATGGAATGGATGAATTTGTACCTCAGAGAACTGCTGCATATATTGGTCAGCATGATGTTCATATTGGAGAAATGACTGTCAGGGAAACCTTAGCTTTCTCAGCAAGGTGCCAAGGAGTTGGATCAAGATATGATTTGCTATCGGAGTTGTGTAGAAGAGAAAAAGAAGCAAAGATTAAACCAGATCCAGATATTGATGTCTACATGAAGGCAGCTTCAACTGAAGGCCAAGAGGCAAGTCTACTAACCGATTATATGCTGAAGATGTTGGGGTTGGATAAATGTGCTGATACTATGGTAGGAGATGAGATGCGGCGAGGTATCTCTGGTGGACAAAGAAAGAGGCTTACGACAGGAGAGATGTTGGTCGGGCCATCAAAAGTTTTATTCATGGATGAAATATCAACTGGCTTGGATAGTTCCACTGCATTTCAAATTGTGAAATCTCTTGGCCAATATGTTCATATTCTTAATGGAACTGCACTTATCTCATTGCTTCAGCCAGCACCCGAGACTTATGAACTTTTCGATGATATTATTCTTTTATCTGATGGTGAAATCGTCTACCAAGGACCTCGTGAACACGTTCTTGATTTTTTTGAATCTGTTGGTTTCAAATGTCCTGAGAGGAAAGGTGTCGCTGACTTCCTTCAAGAAGTAACTTCTAGAAAGGATCAAGAGCAATATTGGATGCACAGAGATATAGCATATAGGTTTGTAACAGTTACTGAATTTGCAGAGGCATTTAAGTCATTCCATGTTGGGAAGAGAATTAAAGAAGAGCTTGAAATTCCATTTGACAAATCTAATAGTCACCCAGCTGCATTAACGACTACAAAGTATGGCATTAACAAGAAGGAACTGTTAAAGGCTAACTTCTCAAGAGAGTATTTGCTTATGAAAAGAAATTCATTCATTTACTTCTTCAAGATGGTTCAAATTGCGATAATGGCAACAATTACTATGACAGTCTTTCTACGAACTGAGATGCACAAAGAAACAGTGTTTGATGGAACAATTTATCTTGGTGCTTTATTTTTCTCATTAACAATACTCATGTTTAATGGAACTTCTGAGGTTACAATGACAATTGTGAAACTTCCAACATTTTTCAAGCAAAGAGACCACAAATTTTATCCTTCATGGGCATATGCTATTCCCTCATGGATCCTAAAAGCCCCTGTTACATTAATAGAAGTTTCTATTTGGGTATTCCTCACCTACTATGTAATTGGATTTGATCCAAATATTTGGAGATTTATTAAGCTGTATTTTCTGCTAATGCTGATAAACCAAGCAGCTTCTGGAATGTTCCGAGCTATTGCAGCACTTTGTAGGAATATCATTATTGCTAACATAACTTCCTTCTATTCAATTCTCATATTTTTCACATTGGGCGGATTCGTTTTGTCAAAAGGTGATATTAAGAGATGGTGGATTTGGGGTTACTGGATATCACCTTTAATGTATGCACAAAATGCTTTAATGGTGAATGAATTCCTTGGAAACAGTTGGAACAAAATAACTCCAAGTTCAAATATGACACTGGGACTTCAAGTTTTGAAATCACGCGGATTCTTCACACATGCGTATTGGTATTGGATAGGAGTTGGTGCATTAATTGGATTTATTTTCCTTACAAACTGTTTATATACTTTGTTTCTCACTTACCTTGATTCATTTGAGAAGCCACAAGCAACAATAAAAGAAGAATCAGGAGGCAATAATACACCAAATGAATTAGAAAACTCTAGAAGATCTAATGCTGTTGCGGATTCTAGACATGGGAAGAAAAGGGGAATGGTTCTACCTTTTGAACCTTATTCTATCACATTTGATGAGATTGTATACTCTGTTGACATGCCACAAGAAATGAAGGATCAAGCTGTAATGGAGGACAGGTTAGTGCTTTTGAAGGGTGTTAGTGGTGCATTTAGGCCTGGTGTTCTCACAGCTTTGATGGGTGTTAGTGGAGCTGGTAAAACTACTTTGATGGATGTTTTGGCTGGTAGGAAAACTAGTGGTTATATTGATGGGAGCATAAAAGTTTCTGGTTACCCTAAAAAGCAAGAAACATTTGCTAGAATCTCTGGCTATTGTGAGCAGAATGATATCCACTCCCCTCAATTTACTGTCTATGAGTCCTTACTATACTCGGCATGGCTTCGTTTACCAGCGGAAGTTGATTCCAATACCAGAAAGATGTTCATTGAGGAAGTCATGGAACTAGTGGAGTTAAATCCATTGAGGAACACAATAGTCGGTTTGCCTGGTGTAAGTGGTCTTTCAACTGAACAACGCAAGAGGTTAACTATTGCAGTTGAATTAGTGGCCAATCCATCCATAATATTCATGGATGAGCCTACATCTGGATTAGATGCTAGAGCTGCCGCAATTGTTATGCGTACAGTCAGGAACACGGTTGACACAGGAAGAACAGTTGTTTGTACCATTCATCAACCAAGTATTGATATATTTGAAGCTTTTGATGAGTTACTCTTAATGAAGAGTGGAGGACAAGAAATATATGTCGGACCATTGGGTCGTTATTCTAATCAATTGATCAAGTATTTTGAGAGCATTGAAGGAGTTAGTAAAATAAAAGATGGATGTAACCCAGCAACATGGATGTTAGAAGTGACTAGTCCATCACAAGAACTTGCTTTAGGTGTTGATTTTCATGAGATATACAAAAATTCTGAGTTATATAGGAGGAATAAGCAACTTATAGCAGAATTGGGCAAACCTGCTCCTGGTTCAAATGATCTTCATTTCCCAACCCAATACTCGCAATCATTTTTGGTTCAATGCATGGCTTGCTTGTGGAAACAACGTTGGTCATATTGGCGCAACCCGCCTTACACTGCTGTGAGGTTTTACTTTGCTACATTCATAGCATTGATGTTTGGAACAATGTTTTGGGACCTCGGACGCAAATACTCAAAAGGACTAGACCTGGCTAATGCCATGGGCTCAATGTACACTGCTGTTTTCTTCATTGGAGTCCAAAATTCTGCTTCTGTACAACCAGTGGTATCTGTTGAAAGAACTGTTTTTTATAGAGAAAAAGCTGCCGGAATGTATTCCGCCTTACCCTATGCACTTGCACAGGTTGTAATAGAGCTACCTTATATTTTTGTACAAGCATTATCATATGGTGTAATAGTTTATGCCATGATTGGATTTGAGTGGACTATACCAAAATTCTTTTGGTATATGTTTTTCATGTACTTCACATTTTGCTACTTCACATTCTATGGTATGATGACAATGGCAGCTGCACCAGATCACCACATTGCTGCAGTTTTGGCATCTGCATTTTATGGACTTTGGAATCTCTTTTCAGGATTTCTCATTCCAAGAACTAGAATGCCAGTGTGGTGGAGGTGGTTTTATTGGGCAAATCCTGTGGCTTGGAGCTTATATGGATTATTTGCATCACAGTTTGGAAATATAACAAACATATTGGAAATGGAAAATGTGTCAGTGCAAGAATATATAAGAAATTATTATGGTATCAAACATGAATTTGTTGGTGTTTCTGCAGCTGTGGTTTCTGGGATAGCAATACTCTTTGCTTTTATTTTTGCTGTATCAATTAAAGTCTTTAACTTTCAACATAGATAA 4260 0.3815 MDRGDIYKSSSSLRGNSSTFFSRSSRREEDDDEEALKWAAIERLPTYNRLKKGLLATSHGVSNEIIDVTKLGLQERQKLLNRLINVAEEDNEMFLLKLKERIDRVGIDIPTIEVRYEHLTVEAEAYVGSRALPTFTNFTIGAVEGLLTLLHILSRKKKHVTILKDVSGIVKPRRMTLLLGPPSSGKTTLLLALTGKLDKTLKESGRVTYNGYGMDEFVPQRTAAYIGQHDVHIGEMTVRETLAFSARCQGVGSRYDLLSELCRREKEAKIKPDPDIDVYMKAASTEGQEASLLTDYMLKMLGLDKCADTMVGDEMRRGISGGQRKRLTTGEMLVGPSKVLFMDEISTGLDSSTAFQIVKSLGQYVHILNGTALISLLQPAPETYELFDDIILLSDGEIVYQGPREHVLDFFESVGFKCPERKGVADFLQEVTSRKDQEQYWMHRDIAYRFVTVTEFAEAFKSFHVGKRIKEELEIPFDKSNSHPAALTTTKYGINKKELLKANFSREYLLMKRNSFIYFFKMVQIAIMATITMTVFLRTEMHKETVFDGTIYLGALFFSLTILMFNGTSEVTMTIVKLPTFFKQRDHKFYPSWAYAIPSWILKAPVTLIEVSIWVFLTYYVIGFDPNIWRFIKLYFLLMLINQAASGMFRAIAALCRNIIIANITSFYSILIFFTLGGFVLSKGDIKRWWIWGYWISPLMYAQNALMVNEFLGNSWNKITPSSNMTLGLQVLKSRGFFTHAYWYWIGVGALIGFIFLTNCLYTLFLTYLDSFEKPQATIKEESGGNNTPNELENSRRSNAVADSRHGKKRGMVLPFEPYSITFDEIVYSVDMPQEMKDQAVMEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIDGSIKVSGYPKKQETFARISGYCEQNDIHSPQFTVYESLLYSAWLRLPAEVDSNTRKMFIEEVMELVELNPLRNTIVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKSGGQEIYVGPLGRYSNQLIKYFESIEGVSKIKDGCNPATWMLEVTSPSQELALGVDFHEIYKNSELYRRNKQLIAELGKPAPGSNDLHFPTQYSQSFLVQCMACLWKQRWSYWRNPPYTAVRFYFATFIALMFGTMFWDLGRKYSKGLDLANAMGSMYTAVFFIGVQNSASVQPVVSVERTVFYREKAAGMYSALPYALAQVVIELPYIFVQALSYGVIVYAMIGFEWTIPKFFWYMFFMYFTFCYFTFYGMMTMAAAPDHHIAAVLASAFYGLWNLFSGFLIPRTRMPVWWRWFYWANPVAWSLYGLFASQFGNITNILEMENVSVQEYIRNYYGIKHEFVGVSAAVVSGIAILFAFIFAVSIKVFNFQHR* 1420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0579 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 821 1073 IPR003439 GO:0005524
Tpr4g0579 1419 MobiDBLite consensus disorder prediction 1 30 - -
Tpr4g0579 1419 CDD ABCG_PDR_domain2 820 1056 IPR034003 -
Tpr4g0579 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 420 IPR027417 -
Tpr4g0579 1419 CDD ABCG_PDR_domain1 142 402 IPR034001 -
Tpr4g0579 1419 Pfam Plant PDR ABC transporter associated 716 779 IPR013581 -
Tpr4g0579 1419 Pfam ABC-2 type transporter 499 711 IPR013525 GO:0016020|GO:0140359
Tpr4g0579 1419 Pfam ABC-2 type transporter 1147 1360 IPR013525 GO:0016020|GO:0140359
Tpr4g0579 1419 Pfam ABC-2 type transporter 378 430 IPR043926 GO:0140359
Tpr4g0579 1419 Pfam ABC transporter 849 1001 IPR003439 GO:0005524
Tpr4g0579 1419 Pfam ABC transporter 163 345 IPR003439 GO:0005524
Tpr4g0579 1419 SMART AAA_5 172 397 IPR003593 -
Tpr4g0579 1419 SMART AAA_5 858 1050 IPR003593 -
Tpr4g0579 1419 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 8 1419 - -
Tpr4g0579 1419 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 420 IPR003439 GO:0005524
Tpr4g0579 1419 MobiDBLite consensus disorder prediction 780 797 - -
Tpr4g0579 1419 PANTHER ATP-BINDING CASSETTE TRANSPORTER 8 1419 - -
Tpr4g0579 1419 Pfam ABC-transporter N-terminal 76 138 IPR029481 -
Tpr4g0579 1419 Gene3D - 835 1071 IPR027417 -
Tpr4g0579 1419 MobiDBLite consensus disorder prediction 780 803 - -
Tpr4g0579 1419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 840 1059 IPR027417 -
Tpr4g0579 1419 Gene3D - 150 454 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0579 Tpr-Chr4 5417584 5425649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0579 K08711 - gmx:100783377 2257.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4961 7 57408615 57416242 Tpr4g0579 4 5417584 5425649 PCT