Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0572 ATGGCGAAGGGAGGACAATGCTTGTTCGAGAAGATTCGGAGGTGTATTCGGACGGTTTTCTTTGTTATTGCATTGGTTGTTTCGCTTATTGTTACGTCGCTTCCGGTGGTTGTTGCGGTGGTGGATATTCTTGTTCCGTTTGTTTTGATCTCAAATTTTACTTGTGTTAAATGCTATAGTTTTAAAGAGCATTTTTACCGTTACTCTTTCAAGAGTTCTTTGATGGATATTCCTCTTGTTTCGCTCTTAAGATCCTTCATCATTATCTGTGTTTATTCGATTTGTGATGGCCCTGCTCTTTCACACGGTCCTTACCTTGGAACTGTGACTCTGTGTTCCTTTTCCTCAATTGTTCTACTTTCAGTCAAAACTTGTGTTTTCACTGTAAATTCACAGATTGAAGCTGAAGCTTCAGTAGCTTCTGTAAAAAGGCAGAGACTCCATTTGAAGAAATCTTGGGGAATGCCTGTGTTGTTTCTTTCGTCGGTTGTGTTTGCTCTTGGTCATACTGTTGTTGCTTATAGAACCAGCTGCAGAGCACGAAGAAAGTTATTGTTTCATCGCGTTGACCCTGAATCTGTCCTATCATGCAAAAGTGTTTTCTCTGGCTATCCGAAGGTCCCTCGTTCTCCTACTCCTTCTGGGGGAAGAACCCCAAAAAGTGACAGTGAAATGAGGCGGAGACCTTTTGGGACATCTCGTGATGAAGAATTGCAGGCAAGATTACTTGCAGATTCAGACAGCTTTTTCATTACATGCCAAGGACTTTCTCTTCATTACAAGCTCAGCTTACCTGGTTCACCACCTCCACATACTTTGTCATCAACATCTTGTGTTGAATCAAATTCTAGTTACAGCATTTCATCAGTGACTGGAGGGTTGGAGAAGTTGGATGGTCATCGGTTAGATATATCTCCGAAGATAGAGTCGCATCTATACCGGAGCTATAGCAATCATATCAGTGGATCATCTCTATATGCCCCTCTACTAGATAGTAATGCAACTTCTGTTTTTTCTGAAGATATCCCTATTTTTCATCTAGATGGTATTTCCGAAGAAAATGGAACTAGCAAATTGGATTCTTTACCCTTGGAGAAAAGTATTGGCCAATTAGGTGTTGTATTCATACATGGGTTTGGCGGAGGAGTTTTCTCCTGGAGGCATGTGATGGGGTCTCTAGCTCGGGAGATTAATTGCGCAGTTGCTGCCTTTGATCGGCCTGGTTGGGGACTAAGTTCAAGGCCGCGTCGGGAGGACTGGGAAGCAAAGGAATTGCCTAATCCTTATAAGCTTGATAGTCAGATTGACCTGCTTTTATCATTCTGTTCTGAGATTGGATTTTCGTCAGTGGTGTTAATCGGTCATGATGATGGAGGATTGCTTGCTCTTATGGCTGCACAAAGAGTTCAAACATCAATGAGTTTTCATAATGTTACTATAAAAGGGGTTGTATTGCTAAATGTTAGCTTATCAAGGGAAGTTGTTCCTTCCTTTGCAAGAATCCTCCTGCATACCTCACTTGGAAAGAAGCATATGGTTCGACCTCTACTAAGGATGGAAATCACTCAAGTGGTGAATCGGCGTGCTTGGTATGACGCTACCAAATTGACTACAGATGTTTTGGATCTCTATAAGGCTCCACTATCTGTTCAAGGATGGGATGAAGCTGTTCACGAGATTGGTAAATTGTCATCTGAAACCATACTTTCAGCAAAAAATGCAGAATCGTTGCTACAAGCTGTAGAAGACATCCCTGTGTTAGTTATTGCAGGTGCTGAAGATTCCCTTGTCTCCTTAAAATCTTGTCAAGCTATGGCCTCAAAACTTGAAAATTCTAGACTGGTTGCAATATCTGGATGTGGCCATTTACCCCATGAAGAGTGTCCAAAGGCATTGCTTGCAGCTATATCACCCTTCATTAGTAGACTCCTGTCCGCATCTGACTCACAAAGCTAA 1956 0.4197 MAKGGQCLFEKIRRCIRTVFFVIALVVSLIVTSLPVVVAVVDILVPFVLISNFTCVKCYSFKEHFYRYSFKSSLMDIPLVSLLRSFIIICVYSICDGPALSHGPYLGTVTLCSFSSIVLLSVKTCVFTVNSQIEAEASVASVKRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPESVLSCKSVFSGYPKVPRSPTPSGGRTPKSDSEMRRRPFGTSRDEELQARLLADSDSFFITCQGLSLHYKLSLPGSPPPHTLSSTSCVESNSSYSISSVTGGLEKLDGHRLDISPKIESHLYRSYSNHISGSSLYAPLLDSNATSVFSEDIPIFHLDGISEENGTSKLDSLPLEKSIGQLGVVFIHGFGGGVFSWRHVMGSLAREINCAVAAFDRPGWGLSSRPRREDWEAKELPNPYKLDSQIDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMSFHNVTIKGVVLLNVSLSREVVPSFARILLHTSLGKKHMVRPLLRMEITQVVNRRAWYDATKLTTDVLDLYKAPLSVQGWDEAVHEIGKLSSETILSAKNAESLLQAVEDIPVLVIAGAEDSLVSLKSCQAMASKLENSRLVAISGCGHLPHEECPKALLAAISPFISRLLSASDSQS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0572 651 Pfam Alpha/beta hydrolase family 373 634 IPR000073 -
Tpr4g0572 651 PRINTS Epoxide hydrolase signature 377 395 IPR000639 GO:0003824
Tpr4g0572 651 PRINTS Epoxide hydrolase signature 452 465 IPR000639 GO:0003824
Tpr4g0572 651 PRINTS Epoxide hydrolase signature 584 600 IPR000639 GO:0003824
Tpr4g0572 651 PRINTS Epoxide hydrolase signature 617 639 IPR000639 GO:0003824
Tpr4g0572 651 SUPERFAMILY alpha/beta-Hydrolases 373 642 IPR029058 -
Tpr4g0572 651 PANTHER ALPHA/BETA FOLD HYDROLASE 3 646 - -
Tpr4g0572 651 Gene3D alpha/beta hydrolase 366 644 IPR029058 -
Tpr4g0572 651 MobiDBLite consensus disorder prediction 206 233 - -
Tpr4g0572 651 PANTHER HYDROLASE 3 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0572 Tpr-Chr4 5339992 5345450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0572 5 648 Miscellaneous Gene Families AT1G80280 65.138 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0572 - - gmx:100817742 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0572 4 5339992 5345450 Tpr4g0572 4 5339992 5345450 ECH
Tpr7g4968 7 57474756 57480090 Tpr4g0572 4 5339992 5345450 PCT