Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0565 ATGGTGAAAGACAAGTTAAAGGAACCTGTTCTTACAGCTTTCACACCTAATGGTGACTATGTGGCCATTCTGTCTTCAAATGCAACGGTCAAGATTTGGAATACAAACAGTGGAGATTTGTTAGCCGAGTGGAAGCCATCAGATGGAGATCATGATATTCATTACTCATGTATTGCATGCAGTTTCACTGGAAAAAAGCGCAAAAAGGATAAGGGAACTTGCTTATTAGCTCTCGGCACAGATGATGGAAAAGTTCTCGCTATTGATGTTTCCACTGGTGAGAGGAAGTGGCCTACTAGTCATCCAATTCCCGGTGGGATTTGTGGACTTTCATTTGCAAAAAAAGGACAGCTTCTTTATGTTGTTGGGCATGATGGGAAGGCATATGAGATTAATTCAGAAACAGGAGAGCTTCTAAAGGAGTTTAGAATCTCAAAAACGTCCATCTCTTCACTGGCTTTCTCACATGATGAAAAATATTTAGCTATTTTCAGCTCTAGACTACGAGTTGTAAGCTGGGAAACTGGGGAAGAGGTTCTGAAGTGCCCTAAAGATTTGGGAAATATACATCGTGTATCTATATCCAATGATGCAAAATATATAATTACATCAGATTCTGTGAGTAAACATCTTCAAGTGTGGAGGCGTGACTTAATTTTAGGAACTGTGAGTAGTGGTCCAAAACTACCCTTTAAGCATGCTCCATTGGTTCTCGATTGCCACCTCGGGTGCAATGAAGAAGATGATTTAGTCGTCTCTGCAGTTATGTCTTCAGGTGGAGCTTACATATGGAAGAATTTGAACGCCTCTTCTGAAGATCAAGTACACCGAACTAAAATAACCTTGAAAACAGAAAATGGTGAAAGTTCAAAGAAAATGCGCACTTCCATAATTGCATCCAGATTTCAATCCACAGGGGAAGACAAACAGATGAAAGCTTTGGTGACTTATGGCTCTGTAGATCATCCACAATTTACTGTCTTAAATATTAGTGATTTAGGGGAGGATGTGGTATTAAATGTGGGAGATGAGCTCGATTCTATTCAGAAGCATGATAGCCCTTCTAAGAAAGCCGTAGAAAAGGAAAGCAAAAAGTCTAAGAAAAGACAAGCAACATCTGATCCTGATCTTCCAACCACAACGGAGAAGGTGGATTTTGATCAATGTGAGACTGCAGAAGGAGTCCTTGATGATGATCCAAGTGAGCCAACAATGGGAGAGAAACTTGCTAGTCTCAATTTACTGGATGAAAACAAATCCAAGAGTGAAAAAGAGCAAGAATCTTTGGTTTCATTGAAGCCTCCAAGTGCAGACAGTGTACATATTTTGCTTAAGCAAGCATTAAATGCTGATGACCGTGCCCTTCTGTTGGATTGCTTGTATACTCAAGATGAGAAGGTTATTATAAAGTCAGTTGCGCAGTTGAACCCATCCAACGTCCTCAAACTTCTTAATTCTCTTATTTCCATTATTGAATCTAGGGGTGCAATTTTGTCATGTGCTCTTCCATGGCTGAAGTGTCTACTTCTACAGCATGCAAGTGGAATAATGTCCCAGGAATCTTCTTTAAAAGTTTTGAACTCTTTGTATCAATTGATTGAGTCCAGAGTCTCCACTTTTAAATCTGTCTTCCAACTCTCAAGTTTCTTAGACATCCTATACACAGGGGTTCTTGATGAGGAGGTAGATGAAGTTGAAACAGTGCCAATTATCTATGTGGACACAGATGACAGTGAGGCAGAATCCGAGGATGTCATGGAAACTGACAAAGATAGCAATGACGGGGAACTATCTGATGAAGGATTTGATAATCTTAGTGACATTGAAGTTAGTGATGGTATGATGGAAGATTAA 1854 0.3981 MVKDKLKEPVLTAFTPNGDYVAILSSNATVKIWNTNSGDLLAEWKPSDGDHDIHYSCIACSFTGKKRKKDKGTCLLALGTDDGKVLAIDVSTGERKWPTSHPIPGGICGLSFAKKGQLLYVVGHDGKAYEINSETGELLKEFRISKTSISSLAFSHDEKYLAIFSSRLRVVSWETGEEVLKCPKDLGNIHRVSISNDAKYIITSDSVSKHLQVWRRDLILGTVSSGPKLPFKHAPLVLDCHLGCNEEDDLVVSAVMSSGGAYIWKNLNASSEDQVHRTKITLKTENGESSKKMRTSIIASRFQSTGEDKQMKALVTYGSVDHPQFTVLNISDLGEDVVLNVGDELDSIQKHDSPSKKAVEKESKKSKKRQATSDPDLPTTTEKVDFDQCETAEGVLDDDPSEPTMGEKLASLNLLDENKSKSEKEQESLVSLKPPSADSVHILLKQALNADDRALLLDCLYTQDEKVIIKSVAQLNPSNVLKLLNSLISIIESRGAILSCALPWLKCLLLQHASGIMSQESSLKVLNSLYQLIESRVSTFKSVFQLSSFLDILYTGVLDEEVDEVETVPIIYVDTDDSEAESEDVMETDKDSNDGELSDEGFDNLSDIEVSDGMMED* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0565 617 PANTHER WD REPEAT-CONTAINING 65 615 - -
Tpr4g0565 617 Pfam Dip2/Utp12 Family 452 553 IPR007148 -
Tpr4g0565 617 MobiDBLite consensus disorder prediction 348 388 - -
Tpr4g0565 617 MobiDBLite consensus disorder prediction 576 590 - -
Tpr4g0565 617 MobiDBLite consensus disorder prediction 573 617 - -
Tpr4g0565 617 Gene3D - 11 305 IPR015943 GO:0005515
Tpr4g0565 617 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 11 217 IPR011047 -
Tpr4g0565 617 MobiDBLite consensus disorder prediction 348 372 - -
Tpr4g0565 617 MobiDBLite consensus disorder prediction 598 617 - -
Tpr4g0565 617 PANTHER OS01G0649000 PROTEIN 65 615 - -
Tpr4g0565 617 Pfam PQQ-like domain 79 191 IPR002372 -
Tpr4g0565 617 ProSiteProfiles Trp-Asp (WD) repeats profile. 13 43 IPR001680 GO:0005515
Tpr4g0565 617 SMART WD40_4 175 215 IPR001680 GO:0005515
Tpr4g0565 617 SMART WD40_4 2 34 IPR001680 GO:0005515
Tpr4g0565 617 SMART WD40_4 37 89 IPR001680 GO:0005515
Tpr4g0565 617 SMART WD40_4 96 132 IPR001680 GO:0005515
Tpr4g0565 617 SMART WD40_4 135 174 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0565 Tpr-Chr4 5275651 5283634 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0565 K14546 - gmx:100792757 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0565 4 5275651 5283634 Tpr4g0565 4 5275651 5283634 ECH