Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0560 ATGGCGTTTTTCTCTTCAACTGCAACCGTTCCACAAAACCTCACTTTCGTTTCCTCTAACAAACTCTCATTCTCTCCTTCTTCCACGACGTCGTTTAACTTCGTTTCATTTCCCTCATTTCAATCCAAGTTCTGCAAAACCATTACTTCCTCTCCACAAATCACACGCGCACACGCGCCTCCTACTCCTTCAACCGAAACCACCACCGCCTCATCCTTCCATGGTCTCTGCTACGTCGTCGGCGACAACATCGACACCGATCAGATCATCCCCGCCGAACATCTCACTCTCGTCCCTTCTAAGCCTGACGAGTACCAGAAGCTTGGTTCATTTGCCCTAATCGGACTCCCCGATTCGTACACCGTACGATTTGTTGAATCCGGTGAGACCAAAACGAAATACTCTATCATCATCGGCGGTGCTAATTTTGGCTGTGGATCTTCCCGTGAGCATGCTCCGGTGGCTTTAGGTGCTTCCGGTGCTGCTGCTGTTGTGGCGGAATCTTATGCGCGGATCTTTTTCCGGAACTCGGTGGCTACTGGTGAGGTGTATCCTTTGGAGTCGGAGACCAGGTTATGCGAGGAGTGTCGCACAGGAGATGTGGTGACAGTTGAGCTCGCGGAGAATCGTTTGATTAATCATACTACTGGAAAGGAGTATCAGTTGAAGCCAATTGGAGATGCCGGTCCGGTGATTGAGGCTGGTGGGATCTTTGCTTATGCTAGGAAAACTGGCATGATTCCTACTCGATGA 753 0.5007 MAFFSSTATVPQNLTFVSSNKLSFSPSSTTSFNFVSFPSFQSKFCKTITSSPQITRAHAPPTPSTETTTASSFHGLCYVVGDNIDTDQIIPAEHLTLVPSKPDEYQKLGSFALIGLPDSYTVRFVESGETKTKYSIIIGGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESETRLCEECRTGDVVTVELAENRLINHTTGKEYQLKPIGDAGPVIEAGGIFAYARKTGMIPTR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0560 250 SUPERFAMILY LeuD/IlvD-like 73 247 - -
Tpr4g0560 250 CDD IPMI_Swivel 79 206 IPR033940 -
Tpr4g0560 250 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 14 249 - -
Tpr4g0560 250 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 77 243 IPR011827 GO:0016836
Tpr4g0560 250 Gene3D Aconitase, domain 4 70 246 IPR015928 -
Tpr4g0560 250 PANTHER BNAA05G34440D PROTEIN 14 249 - -
Tpr4g0560 250 Pfam Aconitase C-terminal domain 134 181 IPR000573 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0560 K01704 - gmx:100809737 335.495