Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0553 ATGAAGGAAAATGTTGGAAACCCTTTACATCTAAAGTCAGTGAATCATATCTCACTCATATGCAGATCAGTTGAAGAGTCAATGGATTTCTACCAAAATGTTCTTGGTTTCTTTCCGATCAGAAGGCCTGGTTCTTTTGATTTTGATGGTGCATGGCTATTTGGCTATGGGATTGGAATTCATTTGCTAGAAGCTGAGAACCCAGAGAAGTTGCCAAAGAAAAAAGAAATAAATCCAAAGGATAATCACATATCTTTCCAGTGTGAGAGCATGGGAGCAGTGGAAAAAAAGCTGAAAGAAATGGAAATCAATTATGTTCGAGCAACAGTTGAGGAAGGTGGAATTCAAGTAGATCAACTATTTTTCCATGACCCAGATGGTTTCATGATTGAGATATGCAATTGTGATAGTCTTCCTGTAATTCCATTAGTTGGTGAAGTGGCAAGATCATGCTCTCGTTTGAATCTTCACCTAATGCAGAATCAGAATCAGCAACAAATTCATAAGATCGTTAAGTGA 519 0.3757 MKENVGNPLHLKSVNHISLICRSVEESMDFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMEINYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARSCSRLNLHLMQNQNQQQIHKIVK* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0553 172 Coils Coil 91 111 - -
Tpr4g0553 172 Gene3D - 3 171 IPR029068 -
Tpr4g0553 172 CDD VOC_like 14 132 - -
Tpr4g0553 172 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Tpr4g0553 172 PANTHER - 1 171 - -
Tpr4g0553 172 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 5 134 IPR029068 -
Tpr4g0553 172 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Tpr4g0553 172 PANTHER BNAC05G11680D PROTEIN 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0553 Tpr-Chr4 5209606 5212419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0553 - - gmx:100306100 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0553 4 5209606 5212419 Tpr4g0553 4 5209606 5212419 ECH
Tpr7g4993 7 57641033 57643909 Tpr4g0553 4 5209606 5212419 PCT