Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0552 ATGGAAGCAATCACCGAAGGAGTTAACAACATTAACATCTCTGATTCTATTAAGAAGAATCGCATTCAAGTCTCCAACACCAAAAAACCCCTCTTCTTTTACGTTAATCTCGCTAAGAGGTATATGCAACAGCATAATGAGGTTGAGCTTTCAGCACTTGGAATGGCTATTGCTACTGTGGTTACTGTTGCTGAAATTTTGAAAAACAACGGTCTTGCTGTTGAAAAGAAAATCATGACATCAACAGTTGACATAAAAGATGATTCCAGAGGTAGACCTGTCCAAAAGGCCAAGATTGAAATATTACTCGGGAAGACTGCAAACTTTGACGAGTTGATGGCTGCTGCCGCTGCAGCTGCTGAAAATGGGGAAAATGGAGATGTTGAAGAGCACACTGCATGA 402 0.408 MEAITEGVNNINISDSIKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDELMAAAAAAAENGENGDVEEHTA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0552 133 Gene3D - 18 128 IPR036882 GO:0003676
Tpr4g0552 133 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 125 IPR014560 -
Tpr4g0552 133 Pfam Alba 20 75 IPR002775 GO:0003676
Tpr4g0552 133 PANTHER - 1 125 - -
Tpr4g0552 133 PIRSF UCP030333_Alba 1 133 IPR014560 -
Tpr4g0552 133 SUPERFAMILY AlbA-like 19 114 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0552 Tpr-Chr4 5203151 5205739 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0552 - - gmx:100305539 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0552 4 5203151 5205739 Tpr4g0552 4 5203151 5205739 ECH
Tpr7g4995 7 57654525 57656513 Tpr4g0552 4 5203151 5205739 PCT