Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0551 ATGGTCGTTTTCTCTGTAAAACCCTTATTCACCATCTTTGTCGTTTCACTCACTCTCCTTGTCGTTTTCACATTGCTATCTCCTCATTACCCTTTTTCCCTCAATCCAATTTCTCGAGAACCCTCACTAGGGGAGGTTGATATATGGAGTGTTCGGAGACTCATGGAATGGAGACCTTGCAAGTGGTGGCTACAAGGGCATCTAACAGCTCTACCATTGGAAACCAATGGATATATCAGAGTGGATTGCTACGGAGGCCTCAATCAGATGCGAAGAGATTTTTGTGATGGTGTGGGCGTCGCTCGGCTATTAAATGCAACACTTGTCCTGCCAAAGTTTGAAGTGGCTTCATATTGGAATGAATCAAGTGGTTTTGCGGATGTATATGATTTAGACTACTTCATTCAACACATGAATGGTTTTGTCAAAGTTGTCAAAACATTACCTCCGGAGATTGCAACAAAAGAACCTGTTCCAGTGGACTGTAGCAAAAGGAAAGGCCAATTTGATTATGTTGAAAGTGTTCTCCCATCTCTTCTAAAACACAAATACATTTCAATCACACCAGCAATGTCCCAAAGAAGGGACAGATACCCTTTGTATGCAAAAGCTGCTCTGTGTCAAGCTTGTTACAAGGCATTACGTCTTGCCAAACCCTTGGAAACGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCTTTTTTGTCACTCCATCTTCGTTTTGAGCCGGACATGGTTGCATACAGCCAATGCCAATACCCCGGTCTTTCACCTGCTTCCATCAAAGCTGTAGAAGCAGCCGTAGCATTAGTGGAGAGAAAACCATGGACTGGAGAGTTAGCCCGCGTTTGGAGACAGCGCGGGAAATGTCCCCTCACACCTAACGAGACAGCTTTAATACTTCAATCTCTTTCCATTCCACCGACCACAAATATATATCTTGCGGCTGGAGATGGTCTGATGGAAATCGAAGGATTAACCAATATTTACACTAACATCTTCACCAAGTCTAGCCTTCTCAATGAAGAAGATTTCACAAGCATGCATGGCAATACAAAAGCTGCATTGGATTATTATATATCTATTAATAGTGATTCTTATATAGCTACATATTTTGGGAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCACAGGGTTGTACAAAACACTATTTTTGAGCAGAAGAGGATTTGCTGAATTAACCTCACAAGGTCTGAGGGGAAAAGAGTTGATGCAAGCCCTATGGAAGGTTCACAGAGACGAGTTTGTCGCGGGAAGAGGCTCCGCTCTTCCCGAGTGTTATTGTGAATTCAAGTTGTGA 1329 0.4281 MVVFSVKPLFTIFVVSLTLLVVFTLLSPHYPFSLNPISREPSLGEVDIWSVRRLMEWRPCKWWLQGHLTALPLETNGYIRVDCYGGLNQMRRDFCDGVGVARLLNATLVLPKFEVASYWNESSGFADVYDLDYFIQHMNGFVKVVKTLPPEIATKEPVPVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLAKPLETKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYPGLSPASIKAVEAAVALVERKPWTGELARVWRQRGKCPLTPNETALILQSLSIPPTTNIYLAAGDGLMEIEGLTNIYTNIFTKSSLLNEEDFTSMHGNTKAALDYYISINSDSYIATYFGNMDKMVAAMRAFTGLYKTLFLSRRGFAELTSQGLRGKELMQALWKVHRDEFVAGRGSALPECYCEFKL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0551 442 PIRSF UCP009360 8 440 IPR024709 -
Tpr4g0551 442 Pfam GDP-fucose protein O-fucosyltransferase 78 386 IPR019378 -
Tpr4g0551 442 PANTHER OS02G0726500 PROTEIN-RELATED 4 441 - -
Tpr4g0551 442 CDD O-FucT_plant 78 392 IPR024709 -
Tpr4g0551 442 PANTHER O-FUCOSYLTRANSFERASE 13 4 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0551 Tpr-Chr4 5195726 5199419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0551 47 440 Miscellaneous Gene Families AT3G54100 32.367 2.03e-58 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0551 - - gmx:100801207 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0551 4 5195726 5199419 Tpr4g0551 4 5195726 5199419 ECH