Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0532 ATGAAGTTACCTTTATTGAATTACATTAATACAAGAGAGCACCCTCTTAATTTGTACCAAGTGGAATATATCTTTCTCATTCTTAATATGCTTAGAGTTCAACATCAAATGGTTTTCTCTTCCTCATGTTCATTCTTTCTTTGGCTTCTCATTTTATCAGCAACATTTTCTCTAGTTTTAGGGAACAAAGCATTTACTGGAACATATGGAGTAAACTATGGTAGAGTATCTGATAATCTACCACCCCCTGAAAGTGTAGTTACACTTCTCAAAGCTGCAAAAATCAAGAACATAAGAATCTATGATGTAAATCCTCAAGTCTTAAGTGCCTTCAAAGGATCTGGAATAGGAATTATAGTATGTCTTCCTAATGAACTTTTGACAGACATAGGTGTAGCCGAAGATCGCGCGATGAATTGGATCAAAGATAATGTTCAACCATATCTTCCAGGAACAAAAATAGTTGGCATTTCTATTGGAAATGAAATTTTAGGTAATGGAGATGTTGGAGTTTGGGAAGCTTTGCTTCCGGCGTCGAAAAATATCTATAGTTCTCTCAATAGACTTGGTCTAGCACATGAAATTGAAGTTTCAACACCACATTCAGAGGCTGTTTTTGCCAATTCATATCCACCATCTTCATGTACATTTAGGGATGATATATTACCTTACATGAAACCACTTTTACAATTTTTTTCACAAATTGGAACCCCTTTTTATATTAATGCATACCCTTTTTTAGCATATAAAAATGACCCTTCACATATTGACATAAACTATGCTTTATTTAAAAAAAATCCTGGCATATATGATGCTAAGTCAAAACTACATTATGACAATATGTTTGATGCTCAAATTGATGCTGCTTATTTTGCATTGGAAAAAGTTGGATTTGATAAAATGGAAGTGATTGTTGGTGAGACTGGTTGGGCTTCTCATGGTGATGATAATGAAGCTGGAGCAACTGTGAAAAATGCAAAAACTTATAATAAAAATATGAGAAAGAGGTTACTTAAGAGAAAAGGAACACCTCATAGGCCTAAAATGTTGGTGAGAGCTTATATATTTGCTTTGTTTAATGAAAATTTGAAGCCTGGCCCTACATCAGAAAGAAACTTTGGATTGTTTAAACATGATGGAAGTATTGCTTATGATATTGGATTTACTGGACTTAGACCTTCATCAGCAACTTCCTCTTTACTTTCCTTCAAGGGTATTGGATCTTCATACGTGATGGTTTCTTCAAGCTGCATTGCAATACTTCTTCTTCTTATAGCATTGTAA 1284 0.3403 MKLPLLNYINTREHPLNLYQVEYIFLILNMLRVQHQMVFSSSCSFFLWLLILSATFSLVLGNKAFTGTYGVNYGRVSDNLPPPESVVTLLKAAKIKNIRIYDVNPQVLSAFKGSGIGIIVCLPNELLTDIGVAEDRAMNWIKDNVQPYLPGTKIVGISIGNEILGNGDVGVWEALLPASKNIYSSLNRLGLAHEIEVSTPHSEAVFANSYPPSSCTFRDDILPYMKPLLQFFSQIGTPFYINAYPFLAYKNDPSHIDINYALFKKNPGIYDAKSKLHYDNMFDAQIDAAYFALEKVGFDKMEVIVGETGWASHGDDNEAGATVKNAKTYNKNMRKRLLKRKGTPHRPKMLVRAYIFALFNENLKPGPTSERNFGLFKHDGSIAYDIGFTGLRPSSATSSLLSFKGIGSSYVMVSSSCIAILLLLIAL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0532 427 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 45 417 IPR044965 GO:0004553|GO:0005975
Tpr4g0532 427 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 45 417 - -
Tpr4g0532 427 SUPERFAMILY (Trans)glycosidases 69 387 IPR017853 -
Tpr4g0532 427 Pfam Glycosyl hydrolases family 17 70 388 IPR000490 GO:0004553|GO:0005975
Tpr4g0532 427 Gene3D Glycosidases 68 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0532 Tpr-Chr4 5048855 5051078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0532 64 402 Glycoside Hydrolase AT3G15800 71.884 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0532 - - gmx:113002394 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0532 4 5048855 5051078 Tpr4g0532 4 5048855 5051078 ECH