Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0531 ATGAATATGGAAGAATTAGTTGTTCAAGATGAATATGTATACAAAGAAGAAACCCTTTTAACAGTTCTAAAAACTTCTCGGTTTTTCAGTGGTGATGGTTTTGTTGTGTATGATTGTAAGGGACAACTCGTTTTCCGATTCGACTCATATGGACCAAACACTCGTGATAAGGAAGAACTTGTTCTTATGAATACACATGGTCGTTCTCTTCTCACTTTGCGCAAAAAGAAACCAAGTCTTCATCAAAGATGGGAAGGGTTCAAAGGAGAGAGAAAAGAGGGTGATAAACCAATCTTCAATGTAAGAAGATCATCAATAATCGCACGGTCAAGAACGACCGTAGCAGTGGAGGTACATGATAACCCAAATATGGAGTACCTCATCGAAGGATGTTTCCCACAAAGATGCTGTAAGATTTTTAACGCCACTAAGAAATTAGTGGCTGAGATTCGTCGCAAGGTGGACCCCACTACTAGTGTCATGCTTGGTAAAGAAGTTTTCATGCTTTGTGTTCAACCTGATTTTGATGTGTCCTTTGCCATGGGATTAGTCTTAGTACTTGATCAGATCAATGGTGAGAATTTCTTTGATAATGGGACCACTGAGACCTCGGTGCACCCTACTACAGAAGATTGA 636 0.3978 MNMEELVVQDEYVYKEETLLTVLKTSRFFSGDGFVVYDCKGQLVFRFDSYGPNTRDKEELVLMNTHGRSLLTLRKKKPSLHQRWEGFKGERKEGDKPIFNVRRSSIIARSRTTVAVEVHDNPNMEYLIEGCFPQRCCKIFNATKKLVAEIRRKVDPTTSVMLGKEVFMLCVQPDFDVSFAMGLVLVLDQINGENFFDNGTTETSVHPTTED* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0531 211 Pfam LURP-one-related 7 186 IPR007612 -
Tpr4g0531 211 PANTHER LURP-ONE-LIKE PROTEIN 8 201 - -
Tpr4g0531 211 PANTHER - 8 201 IPR007612 -
Tpr4g0531 211 SUPERFAMILY Tubby C-terminal domain-like 6 191 IPR025659 -
Tpr4g0531 211 Gene3D - 5 194 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0531 Tpr-Chr4 5043160 5045885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0531 - - gmx:100789078 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0531 4 5043160 5045885 Tpr4g0531 4 5043160 5045885 ECH
Tpr7g5013 7 57764981 57767568 Tpr4g0531 4 5043160 5045885 PCT