Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0529 ATGGCTTTGATAACTTCTCAGCCTAAAAATCCCATTTTCTATAATCACTTTACAACCCTTCATTCTTCAATTCCACAATTCAATAGGTCCATTTTGAATTTTGGGCCATTCTCAAAAAATGCAAAAAACATAAAAATTTGTAACTTTAACTCCAAGTCAAGAACTTTTCACTTGAAAAACAACCCCTTTAACTATAATCCACAAATTTTAGCTAAATCCAATGCTGCAATTGGAGAAGCTACTTTGGAGCAGCCAGAGGAAGTACCATTGAAACATAGAAAGATTTTTCTATCTAATGTTGAAGTGAAGAGAGAAAGAGAAGTTCTTTTTGGAAGGAAATGGAATTCATTGGATATTGGAACTTTTGGTATTGTTTTGTCAATGCATTTGTTATGCTTATTTGCTCCATTCAATTTCAATTGGGCAGCTTTTTGGGTTGCTGTGGCACTTTATGTGATTACTGGACTTTTTGGAATCACACTCTCTTTTCATAGGAATCTTTCTCATAGAAGTTTTAAGCTTCCTAAATGGCTTGAATATTTTTGTGCTTATTGTGGAGTTCTTGCTCTTCAGGGAAATCCAATAGATTGGGTGAGTACTCATAGGTATCACCACCAGTTTTGTGATTCTGAGAAGGACCCTCATAGCCCTATTGAAGGATTTTGGTTTAGCCATATGACTTGGCTATTTGATACCATTTCTATCGCAGAAAGGTGTGGAGAACCAACCAATGTTGGTGATTTAGAGAAACAATCCTTTTATAGGTTTATCAGAAGCACTTACATGGTGCATCCATTTACTATGGGAGTTCTTCTATATGCCATAGGTGGATTTCCTTTCCTTGTTTGGGGAATGGGCGTGAGGGCTGTTTGGGTTTACCACATCACTTGGTTTGTAAACTCAGCTTGCCATGTTTGGGGGAAGCAATCTTGGAACACAAGGGACTTATCAAAAAATAATTGGTGGGTGGCTTTGCTTTCATTTGGTGAGGGTTGGCACAATAACCACCATGCATTTGAGTATTCAGCAAGACATGGTTTAGAGTGGTGGGAAATAGACATGACATGGTACTTGGTGAAATTTCTTCAAGCTATTGGTTTGGCAACTGAGGTTAAAGTACCAAGTGAAAGTCAAAAGCTGAAAATGGCATTTAATAATAATGATGTGGTTGCCACATGA 1179 0.3732 MALITSQPKNPIFYNHFTTLHSSIPQFNRSILNFGPFSKNAKNIKICNFNSKSRTFHLKNNPFNYNPQILAKSNAAIGEATLEQPEEVPLKHRKIFLSNVEVKREREVLFGRKWNSLDIGTFGIVLSMHLLCLFAPFNFNWAAFWVAVALYVITGLFGITLSFHRNLSHRSFKLPKWLEYFCAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMTWLFDTISIAERCGEPTNVGDLEKQSFYRFIRSTYMVHPFTMGVLLYAIGGFPFLVWGMGVRAVWVYHITWFVNSACHVWGKQSWNTRDLSKNNWWVALLSFGEGWHNNHHAFEYSARHGLEWWEIDMTWYLVKFLQAIGLATEVKVPSESQKLKMAFNNNDVVAT* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0529 392 PANTHER ACYL-COA DESATURASE 89 386 IPR015876 GO:0016717
Tpr4g0529 392 CDD Delta9-FADS-like 140 372 IPR015876 GO:0016717
Tpr4g0529 392 PRINTS Fatty acid desaturase family 1 signature 164 184 IPR015876 GO:0016717
Tpr4g0529 392 PRINTS Fatty acid desaturase family 1 signature 201 230 IPR015876 GO:0016717
Tpr4g0529 392 PRINTS Fatty acid desaturase family 1 signature 286 307 IPR015876 GO:0016717
Tpr4g0529 392 PRINTS Fatty acid desaturase family 1 signature 329 343 IPR015876 GO:0016717
Tpr4g0529 392 PANTHER BNAC05G37460D PROTEIN 89 386 - -
Tpr4g0529 392 Pfam Fatty acid desaturase 141 359 IPR005804 GO:0006629
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0529 48 387 Lipid Metabolism Gene Families AT3G15850 66.569 2.28e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0529 K20416 - gmx:100527024 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0529 4 5009520 5012361 Tpr4g0529 4 5009520 5012361 ECH