Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0519 ATGGCCCCAAAATCAGGGAAAGGGAAAACAAATAAAGCAAAGGCAGAGAAGAAGAAAAAAGAAGAGAAAGTTGCACCTTCTCTTGTTGACATCATTGTGGTAACTCCATTTGATTCACAAGTTGTATTAAAGGGTATCTCTACTGATAAGATACTGGATGTGAGGAAACTATTGGCTGTAAAGGTGGAGACATGCCATTTTACAAACTATTCTCTATCTCATGAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTATAATGATGAAACTCAAGCAGTTACACACGTGCGAAGACTATTGGACATAATTGCCTGCACAACAAGGTTCGGAAAGCCCAAACGTAACTTACCAGGCCCAGAATCAAAGCCCAAAAAAAACGGAAAAGCCCAAAATCAAAACAAGAGCAGCGTGAGTCCACCCGCTACACCGAATGGAGAACTTCGGGTCGGGTCACCGTCGTCGGAGCCACCAGCGTCGCCGATATCGGATAATGTCGGAATGGTTGCTATTCACCCGACGCCGAAGTTGTCAGATTTTTACGAGTTCTTCTCTTTCTCTCATCTCACTCCACCGATTTTACATTTGAAGAAATGTGAACTGAAGGATGACGATGATAGACGTAAAGGAGATTACTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAGTGATAGAAGTGGTTGCTTCAGAGAAAGGCTTTTATAGTGTTGGAAAGCTGTCTCTGCAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAACGCTTATGGATCATTGATGAAAGCTTTTTCGGATCGTAATAAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTTGTCGCTCCATCTGTTGGTGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGATGAAAACTGGGGTGGTAATGGTGGCGGCCAAGGAAGAAACGGCGAATATGATCATCGACTATGGGCAACAGATTTTGCTATATTGGCTTCTCTTCCTTCGAAAACTGAGGAAGAGAGGGTGATCAGAGATCGAAAAGCTTTTCTGCTTCATAATCAGTTTGTTGATACATCAATATTTAAGGCTGTTGCAGCTATACAACATGTGATGGAGTCCAAGTCTATTGTGAATTCTTCTCCGGGTTCTGTTCTGCATCAAGATCAAGTTGGAGACTTATCCATTGTAATCGAACGTAACGGAAATGGAAAGGTTGATTCTACATCGAATGAATCCAGTAAACATAATGAGGATGTTCAGAAGAATTTAATCAAAGGGTTGTCTGCAGATGAAAGTGTCACTGTTAATGATACGTCTTCATTGTCTGTTGTTGTTGTTCACCACTGTGGATATACAGCAACAGTTAAGGCTGTGGGTAATGTGAACACGAGGAAGCCTAAAGTTCAAGATATTGAAATAGATGATCAACCAGAAGGAGGCGCAAATGCTCTTAACATCAATAGTTTGAGGGTACTGCTTCACAAATCTGGAGCCGATTCATCGGAAGGGACTTTGACGTCCTTGTCAAATTTTGATGACTTGGATGCTTCTACAGATCTTGTTAGGAAGGTGGTTGAAGAATCCATGGAAAAGATAAAGGAAGAGCCAAGTGTTTCAAAACGGTCTATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAAATTCTACCGATGTCAGTTCCAATAACAAGGATGGAAATGATGTTGAGCAAGCTGTGCAAGGTCTAGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACTTAAACGGTGCAGATTCTGTGGAGCAAAATAACGATGAGCCAAATAATGTTGAACCAAGTAGTTCTAATGAATTAGAGAAACTACTTTCTAAAGAAGCCTTTTTGCGTCTCAAAGAATCCGGATCTGGTCTTCACATGAAGTCAGTGGACGAGCTTATCAACATGGCACACAAGTTTTATGATGAAGTTGCCGTGCCAAAGCTGGTTACGGATTTTGGATCACTTGAACTTTCTCCCGTGGATGGTCGTACACTGACTGATTTCATGCATTTAAGAGGACTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCCCTTTGCATTCATGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCAGTTATTGCTTCTGTTGACAATGTAGTAGATTTACCTTCAGTCATTGCATCGACACTGAATTTCTTACTTGGAACGTGTCGAACTGAAGATACAGACCAAACTTCGGGTGATGATCATAATCTCAGAATTGATTGGTTGCGTACATTTTTGTCAAAAAGATTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGGAAGCTATCTATTCTAAGAGGGCTTTGTCACAAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCACCTAAGCCCTTTGGAAAATATGATATTATCAGCCTTGTTCCTGTTTGCAAGCATGTGGGGTGCTCCTCAATAGACGGACGCAATTTGTTGGAATCATCAAAAATAGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAGCTATGGAACTAAGGCATTAGCAAAGTTGATGACTGTCTGTGGTCCATATCATCGTAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACGGGAGATTTTAATCAGGCCACAATTTATCAGCAAAAGGCATTGGATATAAATGAGAGAGAGCTTGGACTTGACCATCCCGACACAATGAAAAGCTATGGGGATCTTTCTGTTTTCTATTATCGTCTGCAACATATTGAGCTGGCTTTGAAGTACGTTAATCGCGCTCTATTCCTCCTTCATTTCACGTGTGGTCTGTCTCACCCAAATACGGCGGCAACATATATAAACGTGGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTTGCACTTCGGTATCTGCATGAAGCTCTTAAATGCAATAAAAGATTGTTGGGAGCAGATCATATACAGACTGCGGCAAGCTATCATGCCATAGCCATAGCTCTTTCACTGATGGAAGCATATTCTCTGAGTGTCCAACATGAACAAACTACACTTAAGATACTTCAAGCGAAGCTTGGCGCAGAAGATCTTCGAACACAGGATGCTGCTGCATGGCTAGAGTATTTTGAATCAAAAGCAATAGAGCAGCAAGAAGCAGCTAAAAATGGAACTCCAAAGTCAGATACATCCATTGCAAGTAAAGGTCACCTTAGCGTGTCAGATCTCCTGGATTTCATTAGTCCTGACAACGATTCAAAGGGAAGTGACGCACAAAGGAAACAGAGACGTCCAAAGATACTTCCAATAAGTGATAGCAACAGTCAAGAACATGAAGATGCTGCAACAGTGGATGATTCTGCAACAGTGGATGATGCCGTTCTTGTTGACAACACAAAAGAAGCCCCAACAACGGTAAAAGGAAATATAGAAGAAACAAAAGCCACACGTGATTCCAAGGAACCAAAAGAAATTGTTGATCTCAGCAGGCAGAAGCCAGTGGTTACAAGTGAAGCTGTTTACGAGACATCATCTGATGAAGGTTGGCAAGAAGCCATTTCAAAAGGGCGATCATCTAGTGCTGCTAACCGCAAGTCTGGACGCAGACAACGGCCTCTTCTATCAAAGCTCAGCGTTAACGGTTCTGATAATCACATTTACAAGGAAGCCAGCTATAGGAATGACACCTCTTCCCTAGCCCAAAAAGGAGCTCCAAAAGTAGCCTCAGCTATGTTATCTCCACCTAGAAAATCGAACACCCCAAAAGCTGTGGCATCGAAAATTTCATCTACTCCTGCGTCATTGAGTTCTTTGGCCTCAAAGTCTATATCTTACAAAGAAGTCGCTGCAGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAATCTGAGATAGAGAAGGTAAATGATGAAAATGAGACGCCAAAAAGTGAAGGTTCCATCCAAAGTCCTATAGCTGATACAGTTCCACAGCAAGATGAAAAAGAAGCAACAACTCAAGAAGATGAATTCGAACAGGAAAACTCTGCATCAGAACTTGAGAAGGTTTCCCTTTCTTCTGATCCGGCAAAGCCTTCAGAAACAAATGGAAGTAAGCTTTCGGCTGCAGCCAAACCATTCAGTCCAGGAACATTGTCCGCATCTCGCCATATAAATCCAGTTCCTCTCGCAAGCATATATGATGTAAATGGGAGTCAAGGCATTCTTGTGGAACCTATCCTTCCTCCTCCTGCTGCTGCCCGAGTTCCTTGTGGGCCAAGATCACCACTGTATTACAGAACCAACTATACTTTCCGCATGAAACACGGTTCAACGAAAATAAGGGAAATAAGTGGATCAGGGGGTCCACGAATCATGAATCCACATGCTCCTGAGTTTGTTCCAAGAAGCGCTTCTCAAACAGAAACTGGTGAAGTCAAGAATAGTACTTCAAAAAACAGTCTTTCAGAATCTGAGAAGTCGGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAATCTGTTCATCAAAATGCTGATGCTGCGGATGAGCCTAAAGTTAGTGAAATAAAAGTTGAGAATTTTGAGAACTCTTCTGACGAAGTAGCTAAAGACAGCGCGGTCATAAAGATAATGTATGGTACTGAAGAAAATAACAAGACAGTGGTTAATTCCAGTGATGACATTGAAGAGCAAGAAAATAGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAACAGACAGAAAATTGCAAATGGAGTCCCTGAATTGTACAACCAGCCATCAATATGTGCTTCGGTTCGTTGA 4917 0.4155 MAPKSGKGKTNKAKAEKKKKEEKVAPSLVDIIVVTPFDSQVVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEEDYNDETQAVTHVRRLLDIIACTTRFGKPKRNLPGPESKPKKNGKAQNQNKSSVSPPATPNGELRVGSPSSEPPASPISDNVGMVAIHPTPKLSDFYEFFSFSHLTPPILHLKKCELKDDDDRRKGDYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFSDRNKFGNLPYGLRSNTWLVAPSVGESLSNFPALPAEDENWGGNGGGQGRNGEYDHRLWATDFAILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQHVMESKSIVNSSPGSVLHQDQVGDLSIVIERNGNGKVDSTSNESSKHNEDVQKNLIKGLSADESVTVNDTSSLSVVVVHHCGYTATVKAVGNVNTRKPKVQDIEIDDQPEGGANALNINSLRVLLHKSGADSSEGTLTSLSNFDDLDASTDLVRKVVEESMEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDVSSNNKDGNDVEQAVQGLGKQFKLLKKREKKPSDLNGADSVEQNNDEPNNVEPSSSNELEKLLSKEAFLRLKESGSGLHMKSVDELINMAHKFYDEVAVPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVDNVVDLPSVIASTLNFLLGTCRTEDTDQTSGDDHNLRIDWLRTFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKLMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKSDTSIASKGHLSVSDLLDFISPDNDSKGSDAQRKQRRPKILPISDSNSQEHEDAATVDDSATVDDAVLVDNTKEAPTTVKGNIEETKATRDSKEPKEIVDLSRQKPVVTSEAVYETSSDEGWQEAISKGRSSSAANRKSGRRQRPLLSKLSVNGSDNHIYKEASYRNDTSSLAQKGAPKVASAMLSPPRKSNTPKAVASKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKSEIEKVNDENETPKSEGSIQSPIADTVPQQDEKEATTQEDEFEQENSASELEKVSLSSDPAKPSETNGSKLSAAAKPFSPGTLSASRHINPVPLASIYDVNGSQGILVEPILPPPAAARVPCGPRSPLYYRTNYTFRMKHGSTKIREISGSGGPRIMNPHAPEFVPRSASQTETGEVKNSTSKNSLSESEKSEIARQILLSFLVKSVHQNADAADEPKVSEIKVENFENSSDEVAKDSAVIKIMYGTEENNKTVVNSSDDIEEQENSEGFVVVTNRRKNRQKIANGVPELYNQPSICASVR* 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 612 641 - -
Tpr4g0519 1638 SMART tpr_5 991 1024 IPR019734 GO:0005515
Tpr4g0519 1638 SMART tpr_5 949 982 IPR019734 GO:0005515
Tpr4g0519 1638 SMART tpr_5 907 940 IPR019734 GO:0005515
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1350 1368 - -
Tpr4g0519 1638 Pfam Tetratricopeptide repeat 906 976 - -
Tpr4g0519 1638 Pfam Tetratricopeptide repeat 990 1064 - -
Tpr4g0519 1638 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1635 IPR027523 GO:0006996
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1125 1412 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1287 1317 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1498 1526 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1386 1410 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g0519 1638 SUPERFAMILY TPR-like 945 1062 IPR011990 GO:0005515
Tpr4g0519 1638 ProSiteProfiles Clueless (Clu) domain profile. 321 586 IPR025697 -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1335 1349 - -
Tpr4g0519 1638 CDD CLU-central 696 837 IPR033646 -
Tpr4g0519 1638 Pfam Mitochondrial function, CLU-N-term 48 119 IPR028275 -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 141 158 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 620 641 - -
Tpr4g0519 1638 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1635 - -
Tpr4g0519 1638 ProSiteProfiles TPR repeat profile. 907 940 IPR019734 GO:0005515
Tpr4g0519 1638 SUPERFAMILY TPR-like 873 976 IPR011990 GO:0005515
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 128 177 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1247 1277 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1210 1240 - -
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1502 1526 - -
Tpr4g0519 1638 Gene3D Tetratricopeptide repeat domain 866 1113 IPR011990 GO:0005515
Tpr4g0519 1638 MobiDBLite consensus disorder prediction 1185 1202 - -
Tpr4g0519 1638 Pfam Translation initiation factor eIF3 subunit 135 694 836 IPR033646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0519 Tpr-Chr4 4940500 4952482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0519 K03255 - gmx:100801625 2357.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0519 4 4940500 4952482 Tpr4g0519 4 4940500 4952482 ECH