Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0504 ATGGACTCCAATAATTGGGGACCTAATCAGGGTACTGAACCCCCTGGCGACACAGGTGATTGGAGAACTCAACTGCAACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACACTAAGAAAACATCTTCCTGTTTCTGGTTCTGATGGATTACATGAACTTAGGATGATTGCTCAAAGGTTTGAAGATAAGATTTATACTGCTGCGACAAGCCAGTCTGATTATCTACGGAAAATATCCATGAAAATGCTTACAATGGAGAATAAATCTCAAAACACCACTGCCAACAATATGCAATCAAATGAAGGTGGTCCTAGCAATAATCCACCCGATCAAGGGCTCGTTTTACAGTCTCAAGTACTTAATCAAGGGCAGCAACAGCCTCGTCAGCAGCTTCTATCTCAGACTATTCAAAATAATGGTGCACCTCAGCCTAACTTTCCATCGGTATCGAATCTATCCCAGATCCCCAACCAGAAGATTGGCCAAAATTCCAACACACATCAACCTGGGCAAAATTCTGCGAGTAATGCTATTGGCCAGAATTCCAATGTACAGGGTATGTTTCCTGGTTCTCAGAGACAAATGCTAGGAAGGCAGCAGGTTGTTCCCCAACAGCAACAGCAGCAGGTTGTTCACCAACAGCAACCACACAATCCACAACAGATTCTTTACCAACAGCAGCTTCTTAAGCGCAAGTTCCAACTGACGCAACAACAACAGAACCTTCTGCAACCAAATCAATTGCAATCTTCTCAGCAATCTGTTATGCAAACGTCATCGGCTATGCAGCCTTCTTCCATGATGCAAACAACTCTATCTTCTAGCCTTCCACAGAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCCAGGCTTCAGCAACATTCCCAAATTATCAGGCAGCAACAGAATTCTATTGCTCATCAGCAACAAACACCAATGACTCAACAGCCAAACTTGCATGTACAACAGCAGCAGCAGCTTGTAGGGCCTCAGTCAAACACAACGAATGGGCAACATGCTCAGATGCTTGGGCCACAGAGCAATGTCGATGACACACAGAAATCCCAGAGGTTACATCCACAACAGAATAATCTCATGAACCTGCAACAGCGACAGCAACAACAACAGTTACTGAATCAGCAGAACAATCTAACAAATATAAATCAACAGTCAGGAAATAATGTACCAGGGTTACAACAGCAACAACTGTTTGGAACTGAGTCTGGCAACCAAGGCATCCAAACAAGCAATCATTCTGCACACATGCTGCAACAATCAAAGGTTTCAATGCAGCAACAATTGCAACAAAATGCATCAAAATTGTTGCCATCTCAGTCACAGCAGTCCCAGACACAGGCTTCACAGCAGCAATTAATGTCGCAGATTCACAACCATCCTGCACAGATGCAGCAGCCAAATCCCCTGCAACGAGATATGCAGCAAAAACTCCAAGCATCAGGGTCCTTACTTCAACAGCAAAGTGTTCTCGATCAGCAAAAACAACTATATCAATCTCAAAGAGGTCTTCCAGAAACATCAACAACTTCTGTGGATTCTACCATTCAGACTGCACAACCAAGTGGAGCTGATGGGCAAGAAGAAGTTTACCAAAAGCTGCAAACCCTGAAAGAAAATTACTTGTCAGATATAAATGAAATATACCAGAAAGTTTCTCTAAAACTTCAGCAGCACCACTCTATTCCTCGACAGTCAGAGCCAGATCAGGTTGAAAAGATAAGGCAATATAAAATTATGGTGGAACGCTTAATAGCATTCCTACAGCTTCCCAAGCAAAAAATTACGCCTGCTATTAAGGAAAAATTTGGAACATATGAAAAGCAGCTAGTAAGTACCATAAATTCAGTTAGGCCAAGGAGAGGCATCTCTTCACTGCAATCAGGACAGCTTCCCCCAACTCATATGCCTTCGATGCCACAGTCACAATCCCAAGTTACTCCAGTACAGTCTCGTGAAAATCAAATGAACTCTCAGATGCAGCCATCAAATTTACAAGGTTCTGCAGCAACGATACAGCAGAACAATGTTGCGAGCTTGCACCACAATTCTATGTCTGGTTTAGCAACAACACAACAAAATATGTTGAATACAATTCAACCAAGTAATAATTTAGATTCTGGACAAGGAAATTCTGTGAACTCTCTGCAACAGGTTCCAATTAGCTCCCGTCAACAAAACACTGTTAGTACTCCTCAACATACCAACATCAATTCATTACAGTCACAAGGTGGGGTAAATGTGATCCAACCAAATCTAAATACCCACCAGTCAGGTTCCACTATGTTTCAGCACCAGCAGGAACAGAAGATGCTGCAGAATCATCAGCTCAAACAACAATATCAGCAACGTCAATTGATGCAGAGGCAGCAGCAGCTACATCAGCCTGCAAAGCAACAGCTGTCTGGACAACTTCAGACACATCAAATGCCTCAGATTAACCAAATGAATGATATAAATGATATGAAAATGCGACAAGGAATCGGTGTTAAGCCAGGGGTATTTCAGCAACACCTTAACTCAGGTCAAAACTCAGCCTATTCCCATCAACAGTCGAAACAAGGGAGTCCATTTCAGGTTTCTTCACCCCAACTCTTTCAGGCTGCGTCTCCTCAAATTCCACAACATTCATCTCCCCAAATTGACCAACAAACTCATCTCCAGTCTCTAACAAAAGTTACAACTCCTCTGCAATCTTCTAATTCACCTTTTGGGGTCCCTACTCCTTCACCTCCCATGGCTCTATCTCCTATGCTAGGAGACTCTGAGAAGCCCATTCCTGGCGTTTCATCATCAAATGCTGCCAATGTTGGACAACATACAGGGGGTGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCCAGATGCGTATTGTAATACTTTAGCAGCTGCTTCTGGGAAGTCAACTGCAGAGAAACCTATTGATCGTCTAATCAGAGCGGTTCAATCAATGTCAACTGAAACATTAACTGCGGCTGTCAATGATATTAGTTCAGTTGTCAGCATGAGTGATATGATAGCAGGAGCAGCTCCAGGTAATGGATCAAGAGCAGCTGTTGGCGAGGATTTGGTTTCCATGACTAATTGTCGTCTTCAGGCTAGAAATTTTATTACTCAAGATGGTACTAGTGGAATCAGGAAGATAAAGCGCTACACCAGTGCTAGACCGTTGAATGTTGTGTCATCTGCTGGAAGCAAGAATGATAGTACCAACCAGTTATCTGCTTCAGAGGCTTCTCAGCAGGAATCAACTGCAACATCCAATGTCAAGAAGCCAAAGGCTGAGGTTAATCACGCCCTTTTGGAAGAAATACAGCAAATTAATTGGCGACTTATCGACACTGTAGTAGACATAAGTGATGAAAATGTTGGTTCAACTGCAGTTTCTGCAGCTGAAATGGCAGAAGGGACCGTGGTCAAATGTTCTTTTGTTCCGGTGGCTCTCAGTCCAACTTTAAAATCTCAATATGCTTCACTACAGTCACCTATTCAGCCCCTGCGTTTGCTGGTTCCTCCAAATTATCCTAATTGTTCTCCCATATTCCTAGACAAGTTTCCAGTTAAATCCCGTGAGGGGAATGAAGATCTTTCAGAGAAAGCAAAATCAAAGTTTAGCACATCCTTGCGTAATTTATCACATCCTATGTCCCTTAAGGATGTAGCAAAGACTTGGGATACTTCTGCTCGCGGTGTTATTTCTGAGTATGCACAACAATTTGGCGGAGGAACATTCAGCTCTAAGTATGGAGCTTGGGAGTATGGAACTTGGGAGGATATCTTGGCTGCATAA 3867 0.4303 MDSNNWGPNQGTEPPGDTGDWRTQLQPDSRQRIVNKIMDTLRKHLPVSGSDGLHELRMIAQRFEDKIYTAATSQSDYLRKISMKMLTMENKSQNTTANNMQSNEGGPSNNPPDQGLVLQSQVLNQGQQQPRQQLLSQTIQNNGAPQPNFPSVSNLSQIPNQKIGQNSNTHQPGQNSASNAIGQNSNVQGMFPGSQRQMLGRQQVVPQQQQQQVVHQQQPHNPQQILYQQQLLKRKFQLTQQQQNLLQPNQLQSSQQSVMQTSSAMQPSSMMQTTLSSSLPQNQQSNNVQQSTQSRLQQHSQIIRQQQNSIAHQQQTPMTQQPNLHVQQQQQLVGPQSNTTNGQHAQMLGPQSNVDDTQKSQRLHPQQNNLMNLQQRQQQQQLLNQQNNLTNINQQSGNNVPGLQQQQLFGTESGNQGIQTSNHSAHMLQQSKVSMQQQLQQNASKLLPSQSQQSQTQASQQQLMSQIHNHPAQMQQPNPLQRDMQQKLQASGSLLQQQSVLDQQKQLYQSQRGLPETSTTSVDSTIQTAQPSGADGQEEVYQKLQTLKENYLSDINEIYQKVSLKLQQHHSIPRQSEPDQVEKIRQYKIMVERLIAFLQLPKQKITPAIKEKFGTYEKQLVSTINSVRPRRGISSLQSGQLPPTHMPSMPQSQSQVTPVQSRENQMNSQMQPSNLQGSAATIQQNNVASLHHNSMSGLATTQQNMLNTIQPSNNLDSGQGNSVNSLQQVPISSRQQNTVSTPQHTNINSLQSQGGVNVIQPNLNTHQSGSTMFQHQQEQKMLQNHQLKQQYQQRQLMQRQQQLHQPAKQQLSGQLQTHQMPQINQMNDINDMKMRQGIGVKPGVFQQHLNSGQNSAYSHQQSKQGSPFQVSSPQLFQAASPQIPQHSSPQIDQQTHLQSLTKVTTPLQSSNSPFGVPTPSPPMALSPMLGDSEKPIPGVSSSNAANVGQHTGGAAAPAQSLAIGTPGISASPLLAEFSGPDAYCNTLAAASGKSTAEKPIDRLIRAVQSMSTETLTAAVNDISSVVSMSDMIAGAAPGNGSRAAVGEDLVSMTNCRLQARNFITQDGTSGIRKIKRYTSARPLNVVSSAGSKNDSTNQLSASEASQQESTATSNVKKPKAEVNHALLEEIQQINWRLIDTVVDISDENVGSTAVSAAEMAEGTVVKCSFVPVALSPTLKSQYASLQSPIQPLRLLVPPNYPNCSPIFLDKFPVKSREGNEDLSEKAKSKFSTSLRNLSHPMSLKDVAKTWDTSARGVISEYAQQFGGGTFSSKYGAWEYGTWEDILAA* 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0504 1288 Coils Coil 375 395 - -
Tpr4g0504 1288 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1 1288 - -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 506 537 - -
Tpr4g0504 1288 Gene3D Coactivator CBP, KIX domain 20 99 IPR036529 GO:0003712|GO:0006355
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 506 535 - -
Tpr4g0504 1288 Pfam KIX domain 18 98 IPR036546 -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 642 679 - -
Tpr4g0504 1288 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1 1288 IPR044661 GO:0003713|GO:0031490
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 1 24 - -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 428 493 - -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 1085 1117 - -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 197 219 - -
Tpr4g0504 1288 SUPERFAMILY Kix domain of CBP (creb binding protein) 17 93 IPR036529 GO:0003712|GO:0006355
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 853 896 - -
Tpr4g0504 1288 MobiDBLite consensus disorder prediction 248 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0504 Tpr-Chr4 4746177 4756499 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0504 K14972 - gmx:100805336 1451.42