Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0498 ATGTCATATAATTCTAAATCAACCTTTGATGAACTTAAATGGGTGATTCATATAAGAAAAACCCTTGAAGAAGAATTTGAAGAAGAAGATGGTGAATTATCTGTAACCATTTTCAATGTTCCAAAGCTTCTTATGGCTAGTGATCCAGATTCCTATATTCCACAACAAGTTGCAATTGGTCCATACCATTATTGGCGACCGGAACTTTATGAAATGCAAAGTTACAAGCTTGCGGCAACAAAAAGATTCCTAAAATCACTACAAACTCTCAAACTAGACAACCTTGTTGACCAATTGACAAAGTTGGAACAAAGGGTTAGAGCATGTTACCACAAATACTTAGATTTGAACGGCGAAACGATGGTATGGATGATGATTGTTGATGCATCATTCTTACTTGAGTTACTTCAAATTTATGCAATTCAAGAAGGTGCAACAAAAAGGGTAGTTTCGTCAAGCATGTCACATTTAGTTGACTATGCTGGAAGAAAATCAGCACATAATGCAATGTTGAGAGACCTTGTTATGTTAGAGAATCAAATTCCATTATGTGTATTGAGAAAAATGCTTAAGTTCAAATTCTCATCAAAAGAAGCTGCCGATGAAATGTTGATTTTCATGTTCATAGGTTTGTTTAAAGAAATTTCACCTTTCAAAATGATCGAAGATTTTCCAAACATTAAAGTCTCCGAAAGTGCACATTTGTTAGATTTCTTTTATGACATGATTGTGCCTAAATTAGAAACTGAACAAGATGTTACTATTGATGTTGAGATTCAACAAGAAGAGGAACAAGATCACAAAGGAGATGATGAAGGTGATTCTAGTTATGTTAAGCAATCATTCAATGAACTTTGGAAGATTCTTTCAAAACTTAACAAAGGACCTATGAAATTACTAAAAAGGGCACTTGTATCAAGACCTTTGAAATTACTTGTAAAGTTTCCTTGGAAAATCATAACCAATCTTCCTGGAGGTAAACTTCTAAAACAACCTCTTGAATCTATTTTTTCCCCTAAAGAGAAAGGTGATGAAGAAAATCAAGAAAATGAAACTTCTAGTACTCTTATTAATAAGTCACCTTTGATTGAAGAAATCACTATTCCTAGTGTTAAAGAGCTCATGAATTCAGGTGTGAATTTTTTCCCTACTACTAATGGAAGCATATCAAGTATTAGTTTTGATGCAAAAGCAAGAGCATTTTACCTTCCAATAATTAGTTTGGATGTTAATACCGAAGTTTTTCTACGAAACTTGGTTGCATATGAATCATCAGTTGGATCAGGACCATTGGTTATAACTCGATACACTGAATTGATGAATGGAATTATAGACTCGGAGGATGATGCAAAGATTCTAAGAGAAAAAGGGATTATTTTAAATCACTTAAAGAGTGATAAAGAAGTTGCTAACATGTGGAATGGAATGAGCAAGTCATTGAGATTGTCTAGGGTATTGTTCATGGATAATGCTATTGAAGATGTTAACAAGTTTTACAATAGTAGAATGAAGGTGAAAATTTGGAAATTTATGAAGTCATATGTGTTTGGTTCATGGAAATTCTTAACATTTTTAGCTGCTATTTTCTTGTTGCTTTTGATGGCTGTGCAAGCTTTTTGCTCAGTCTACTCATGTAGTCGCTTTTTTGATAAGGCACTACAACAAAGTGATTAA 1674 0.3327 MSYNSKSTFDELKWVIHIRKTLEEEFEEEDGELSVTIFNVPKLLMASDPDSYIPQQVAIGPYHYWRPELYEMQSYKLAATKRFLKSLQTLKLDNLVDQLTKLEQRVRACYHKYLDLNGETMVWMMIVDASFLLELLQIYAIQEGATKRVVSSSMSHLVDYAGRKSAHNAMLRDLVMLENQIPLCVLRKMLKFKFSSKEAADEMLIFMFIGLFKEISPFKMIEDFPNIKVSESAHLLDFFYDMIVPKLETEQDVTIDVEIQQEEEQDHKGDDEGDSSYVKQSFNELWKILSKLNKGPMKLLKRALVSRPLKLLVKFPWKIITNLPGGKLLKQPLESIFSPKEKGDEENQENETSSTLINKSPLIEEITIPSVKELMNSGVNFFPTTNGSISSISFDAKARAFYLPIISLDVNTEVFLRNLVAYESSVGSGPLVITRYTELMNGIIDSEDDAKILREKGIILNHLKSDKEVANMWNGMSKSLRLSRVLFMDNAIEDVNKFYNSRMKVKIWKFMKSYVFGSWKFLTFLAAIFLLLLMAVQAFCSVYSCSRFFDKALQQSD* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0498 557 Coils Coil 85 112 - -
Tpr4g0498 557 Pfam Plant protein of unknown function 37 533 IPR004158 -
Tpr4g0498 557 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 4 546 IPR004158 -
Tpr4g0498 557 PANTHER UPF0481 PLANT-LIKE PROTEIN 4 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0498 Tpr-Chr4 4705087 4706760 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0498 - - gmx:100806933 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0498 4 4705087 4706760 Tpr4g0498 4 4705087 4706760 ECH