Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0492 ATGGCGCTCCTTCTTCGCCTCAAAACAACCAGACCCAAATCCCACTCTCTCACCAACTCTCCTTCTCTCCACCACCTCTTCTCCACCACCGGCGACGACGGTGGCGACCATGGCAAAAAACCATCATTCTTCGACTCTTTACGAGATCTCAAAGGCTCACTCAAACGACAACCAACCTTCAATTCGTCACAAAATGATTCCGTTTCCGATGTCATGAGCAAAATCCAGAGTTTTCGAAACAGAACCGAGGCACCAGTTTCCGACGATCGATCTCCAGCGAAACTAATCTCGTTCCAGGAGATTTACAAGAACCGATCCAGTTTAAAAACCGGTTCGGAAGGATCAAACCATGGTACCGCCATCAGTGGCGGAGGCGGCACTGGAGGAGGTAAATCGTTGTTGGGTTTCGATGCGATTCGAGAAAGTTTATCAAAGCTCAACAATACGAATCAAGGGTCACTTCCGAAATTGAGGTCGAGTTCGCCGGAGATTAATGGGCCTGGTAGTTTGCCGGCTAACATTTTCGGAAAGGAGTTAAGGGAAGTAGCGAATTCGGAGAATAAATTCGTTAGGTTTTATAAGCCTGATGAATTGGGTGAGAAATTGAAGAAATTGAGACCTCAAGTGAAAGGAAAAGATTGGTTTTCAATTGCTGAATTGAGTGATAGGTTGAAGAAAGTGAGGGAAATGGATGAAATTGAAGCTAGTTCCAATACCAATGACGACATTAATAAAACAATACCTTTCGGGAGTTTGAGAAATGCAATTGGACATATTAAACCTGAGCCGCCAAAGAAAGTTCCACTGCAGAGACTTGATTTTTTGAACATAATGAATGGGACTCCAAGTTACTTGACAAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTTCACCCAGATAACATGTCCTCTGCTGAAAAGTTGAAAATTGAGCTCACAAAGGTTAGAGATGAATTTAAGATGTCTGAGTCAGATTGTGGCTCTGCTCCTGTTCAAGTTGCGACACTCACTACCAAGATTAAACATCTATCATCAGTTCTACACAAGAAGGATGTGCATTCTCGGAAGGGTCTGATAGCAATGGTTCAAAAGAGGAAAAAGTTACTGAAATACCTTAGAAGAACTGACTGGGATTCCTATTGTGTTGTTATCTCTAAGCTAGGTCTACGTGATAATCCAGAATATACTTACAAAGCTCGGACCGGTAAATCAGGCGACGTAGCCAATTAA 1233 0.4282 MALLLRLKTTRPKSHSLTNSPSLHHLFSTTGDDGGDHGKKPSFFDSLRDLKGSLKRQPTFNSSQNDSVSDVMSKIQSFRNRTEAPVSDDRSPAKLISFQEIYKNRSSLKTGSEGSNHGTAISGGGGTGGGKSLLGFDAIRESLSKLNNTNQGSLPKLRSSSPEINGPGSLPANIFGKELREVANSENKFVRFYKPDELGEKLKKLRPQVKGKDWFSIAELSDRLKKVREMDEIEASSNTNDDINKTIPFGSLRNAIGHIKPEPPKKVPLQRLDFLNIMNGTPSYLTKPPKEHLVEKYFHPDNMSSAEKLKIELTKVRDEFKMSESDCGSAPVQVATLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCVVISKLGLRDNPEYTYKARTGKSGDVAN* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0492 410 MobiDBLite consensus disorder prediction 147 167 - -
Tpr4g0492 410 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 408 - -
Tpr4g0492 410 MobiDBLite consensus disorder prediction 107 127 - -
Tpr4g0492 410 CDD Ribosomal_S15p_S13e 312 389 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tpr4g0492 410 Hamap 30S ribosomal protein S15 [rpsO]. 303 392 IPR005290 GO:0003735|GO:0005840|GO:0006412
Tpr4g0492 410 Pfam Ribosomal protein S15 315 391 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tpr4g0492 410 MobiDBLite consensus disorder prediction 11 27 - -
Tpr4g0492 410 MobiDBLite consensus disorder prediction 147 168 - -
Tpr4g0492 410 Gene3D - 358 393 - -
Tpr4g0492 410 Coils Coil 306 326 - -
Tpr4g0492 410 MobiDBLite consensus disorder prediction 8 44 - -
Tpr4g0492 410 SUPERFAMILY S15/NS1 RNA-binding domain 313 392 IPR009068 -
Tpr4g0492 410 SMART Ribosomal_S15_2 313 391 IPR000589 GO:0003735|GO:0005840|GO:0006412
Tpr4g0492 410 Gene3D - 309 356 - -
Tpr4g0492 410 TIGRFAM S15_bact: ribosomal protein uS15 314 391 IPR005290 GO:0003735|GO:0005840|GO:0006412
Tpr4g0492 410 MobiDBLite consensus disorder prediction 30 44 - -
Tpr4g0492 410 MobiDBLite consensus disorder prediction 107 122 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0492 - - cam:101488736 450.669