Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0486 ATGGCAATAGTAGAAGAACTGTATTATTTACCAGAAGAATGTTGGGAACATATATTGAAAATATTCCTCAAGGAATGCGGCTACCACAGCCGTTACTTGCAATCTCCATCCGTCGTCTCGAAACAGTTTCTCTCTGTAACAGACCATTGTACATCCTCTCTTACAATCTTTAACCAAACCCTCCCTTTCCTTCCTCGACTCTTCCAAAGATTCACCAACCTCACCTCCCTCGACCTCAGTCACTTCACGGGTAACCGTGACGTGCTTCTAACCAACATCTCTCGTTTCGGCTTACAAGTCAAATCACTTAATCTCTCTAACCACTGCTACATTCCCGTATATGGTTTACATGTTTTCTCTCAACAAATTACAACTTTGACCTCTCTAATTTGTTCAGGCATTTATTCCTTCCGTAAGTCTGATCTTTTCCTTATTGCTGATTGTTTTCCTTTTCTTGAAGAACTTGACCTAAGTTCAAGTTCTTCTGAATATTATAGTTTCTATGAAGATTTTGATATAAATGCTGTTTCATTAGCACTCCCTAAGCTCCGCAAGGTTAATTTCTCAGGTAGCAATTATATTAAGGACTCATCACTTTTTCATCTTTGTAAAAATTGTGAGTTTCTTGAAGAGGTTGTGATGTTTAATTGCAAACACTTAACTCATTTTGGCATTGCTTCTGCTATCCGTGAAAGACCATATTTGAGGTCTCTCTGCACTAATTTACCAAGAATACTGAACATCGATATGGAGTTGATCGATTCTCTACGGAGTTTGAAGTGTTTGAGCGTCCTTGATTTGTCATGTTCATTTATCTCGGATCAATTGCTCTCATCTCTTGCAGATGAAGGACTACCTTTGAGGAGACTCGTGCTAAGAGATTGTGGCGGCTATAGTTATACTGGAATCTTAGACTTGTTATCTAAGTCTCCTCGTTTTCTACAGCATTTGGATCTTCAACATGCTATGTTTCTAAATGATCAACTTGTTGCTGAGTTGTCTAAGTATCTTTTATCTTTGGTATCTATAAACCTTCGTTATTGTAGTAAACTCACAGAATCAACATTATTTGTACTTGTTGAAACATGTCCTTTCCTAGATGAGATAAGAATGGAATACACACATATTGGAAAATCCTGTGTAGACAAGTATAGTTCTTTTAGGGATTCTGTTGTAAACCGTCGAATGAAAATGAAGTCTCTCCATTTGGGTTACAATCAATATTTGAACAATGAAACCATCAAATTCTTTGCTTCAATCTTCCCAAATTTGCAGCTGATTGATGTGAGCGAATGTCATTGCATATCTGATGATGGTATAGTTGAAGTTTTAAGATGTTGTCAAATTATGCATTTGAATTTAACTTCTTGTCAAAAAGTGAACCTACTTGCGATGAACTTCCAAGTTCCTAAATTGGAGGTGTTGAACTTGTCATTTACAAGAATTGACGATAAAACACTTGATGCGATCTCAAAGAGTTGCACAGGGCTATTACAATTGGATTTGAAAAGATGTTATAATATCACAGGGAAGGGAGTGAAGCAAGTGGTAGAAAACTGCACACAGCTGAGAGAGATAAATTTGCAGCATTGTTGCAAAGTGTCTTCTGATGTTGATTTTCAGACGGCGATGGTATTGTTGAGGCCATCATTGAGAAAGATTATACCTCCCTATGATTTTCGTCCTAGTAACAGCAAGTGGAAACCCTTATTTGGTCGTGGATGCTTTCGTTTTTAG 1737 0.3736 MAIVEELYYLPEECWEHILKIFLKECGYHSRYLQSPSVVSKQFLSVTDHCTSSLTIFNQTLPFLPRLFQRFTNLTSLDLSHFTGNRDVLLTNISRFGLQVKSLNLSNHCYIPVYGLHVFSQQITTLTSLICSGIYSFRKSDLFLIADCFPFLEELDLSSSSSEYYSFYEDFDINAVSLALPKLRKVNFSGSNYIKDSSLFHLCKNCEFLEEVVMFNCKHLTHFGIASAIRERPYLRSLCTNLPRILNIDMELIDSLRSLKCLSVLDLSCSFISDQLLSSLADEGLPLRRLVLRDCGGYSYTGILDLLSKSPRFLQHLDLQHAMFLNDQLVAELSKYLLSLVSINLRYCSKLTESTLFVLVETCPFLDEIRMEYTHIGKSCVDKYSSFRDSVVNRRMKMKSLHLGYNQYLNNETIKFFASIFPNLQLIDVSECHCISDDGIVEVLRCCQIMHLNLTSCQKVNLLAMNFQVPKLEVLNLSFTRIDDKTLDAISKSCTGLLQLDLKRCYNITGKGVKQVVENCTQLREINLQHCCKVSSDVDFQTAMVLLRPSLRKIIPPYDFRPSNSKWKPLFGRGCFRF* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0486 578 SUPERFAMILY RNI-like 304 538 - -
Tpr4g0486 578 Gene3D Ribonuclease Inhibitor 465 555 IPR032675 -
Tpr4g0486 578 SUPERFAMILY RNI-like 59 380 - -
Tpr4g0486 578 PANTHER UNCHARACTERIZED 9 236 - -
Tpr4g0486 578 PANTHER UNCHARACTERIZED 397 542 - -
Tpr4g0486 578 SMART LRR_CC_2 284 309 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 421 446 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 469 493 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 71 96 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 311 336 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 520 550 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 180 205 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 337 362 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 206 231 IPR006553 -
Tpr4g0486 578 SMART LRR_CC_2 494 519 IPR006553 -
Tpr4g0486 578 Gene3D Ribonuclease Inhibitor 30 366 IPR032675 -
Tpr4g0486 578 Gene3D Ribonuclease Inhibitor 390 464 IPR032675 -
Tpr4g0486 578 PANTHER NODULIN-LIKE PROTEIN 397 542 - -
Tpr4g0486 578 PANTHER NODULIN-LIKE PROTEIN 9 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0486 Tpr-Chr4 4608055 4609791 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0486 K10268 - gmx:100819538 475.322