Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0485 ATGGCAGCACCACAATCAGATTTACGTTTACCTCACGAGTGCTGGGAATTAATCTTCAAATTCCTCCTCATCAACGACGCCGGCGACGCCGAACGCAACCACCGCTACTTCGAATCACTCTCCCTCGTATCCAAACAGTTTCTCTCCATAACCAACCATCTCCGATTCTCTCTCACAATCTGCGATCCAACTCTCCCTTTCCTCCCTCACCTCTTTCAAAGATTCCCAAATCTCACCTCTCTTAACCTCACGCGCTTCGAAGGTGACATCGACGCGCTTCTCACCCAAATCTCAACTTTCCCATTACACCTCAAATCACTCAAAATCTCAAACAAATCCAACATTCCTGCAAATGGGTTGCGAGAATTCTCCAAAAAGATTACATCTTTGACCTCTCTCACTTGTTCCCACATTGGTAAAATCCGTTCCCATGACCTAGTTCTTATCTCTGATTGTTTTCCTTTGCTTCAAGAACTTGACCTTAGTAACCCTAGAAAAGTTCCTTCTGAGCTGAATTCCAAGTTTTTCGTGCTTCCCAAGCTTCGTAAAATTAATCTCTCTGGTCATTATTATATGAATGACTCATTGTTTTTGCACTTGTGTAAGAATTGTGAGTTTCTTGAAGAGATTGTAATGTTGAACTGTAGCTTTTGCCAAGAAGGTGTTGCTTTTGCCTTCCGCGAAAGACCGGGTTTGAGATCTCTTTCGTTTGGATGGAGATCATTCATTCAAAATGATGATTGCTCACAATATATTGACTCGTTGGTGAGTTTGAAAGGCTTAACTTGTTTTAATTTGTCGGGTTCATTTATATCAGATGAAACGCTTTTAGCTATTGCAAATAATGGTCTTCCTATAAGGAGGCTTGTCCTTCAACTTTGCTTTGGATATAGTTATGTTGGCCTGATTAACTTAGTGTCTAAGTGTCGTTTTCTTCAATATTTGGATCTTGACGGTGCTCATTTTTTGAATGATGGGCATATCCTTGAGTTGTCTCGGTTTCTTGGTGATTTGGTGTCTATTAACATTAGTAGATGTCATAGCCTCACAAGTTTAGCCTTGTTTGCACTCCTTAGGAACTGTGCTAAACTTAATGAGGTCAGAATGGAACACACGAGTATTGGGAAAATGAGTGTAGAAAATTCTTCTAACTTGATGAATTTTGTTGTATATCCTCATTTGAAGTCTCTCTATTTAGGCTTCAACACATGGTTGAGGAATGACGGCATCAATATGTTTGCTTCCGTTTTCCCCAATTTACAGATCTTGGGTTTGAGCTATTCCAATGGCATATTTGAAGAAGGTATTGGTCAAGTTCTAATGAAATGTAGTAAGATTAGACATTTGACCTTAGCCTACAGTTCAGGACAGAAACTACCTAAAATGAAGTTTAATGTTTCCATGTTAGAGGTGTTGAATTTGGCACATACAGGAGTTGATGATGAAACACTCCATATGATCTCAAAGAGTTGCTTTGGGCTACTGCAACTTGACTTGAGAGATTGTCATGATGTCACAGAGAAGGGAGTGATGCAAGTCATAGAAAATTGCACACAATTGCGAGAGATAAATTTGTCCAATTGTGGTAAAGTGAGTGCTGGTGCTGTTGACTCGATGGTATTTATGAGGCCGTCATTGAGAAAGATAACACCTCCACCTGGTTTTTGTTGTAGTGATAGCAAGCGGAAACTCTTATTGCGTCATGGATGTCTTGTTTGCTAG 1722 0.4007 MAAPQSDLRLPHECWELIFKFLLINDAGDAERNHRYFESLSLVSKQFLSITNHLRFSLTICDPTLPFLPHLFQRFPNLTSLNLTRFEGDIDALLTQISTFPLHLKSLKISNKSNIPANGLREFSKKITSLTSLTCSHIGKIRSHDLVLISDCFPLLQELDLSNPRKVPSELNSKFFVLPKLRKINLSGHYYMNDSLFLHLCKNCEFLEEIVMLNCSFCQEGVAFAFRERPGLRSLSFGWRSFIQNDDCSQYIDSLVSLKGLTCFNLSGSFISDETLLAIANNGLPIRRLVLQLCFGYSYVGLINLVSKCRFLQYLDLDGAHFLNDGHILELSRFLGDLVSINISRCHSLTSLALFALLRNCAKLNEVRMEHTSIGKMSVENSSNLMNFVVYPHLKSLYLGFNTWLRNDGINMFASVFPNLQILGLSYSNGIFEEGIGQVLMKCSKIRHLTLAYSSGQKLPKMKFNVSMLEVLNLAHTGVDDETLHMISKSCFGLLQLDLRDCHDVTEKGVMQVIENCTQLREINLSNCGKVSAGAVDSMVFMRPSLRKITPPPGFCCSDSKRKLLLRHGCLVC* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0485 573 SUPERFAMILY RNI-like 103 320 - -
Tpr4g0485 573 Gene3D Ribonuclease Inhibitor 30 351 IPR032675 -
Tpr4g0485 573 SUPERFAMILY RNI-like 293 549 - -
Tpr4g0485 573 SMART LRR_CC_2 178 203 IPR006553 -
Tpr4g0485 573 SMART LRR_CC_2 491 516 IPR006553 -
Tpr4g0485 573 SMART LRR_CC_2 335 360 IPR006553 -
Tpr4g0485 573 SMART LRR_CC_2 517 542 IPR006553 -
Tpr4g0485 573 SMART LRR_CC_2 101 126 IPR006553 -
Tpr4g0485 573 SMART LRR_CC_2 258 282 IPR006553 -
Tpr4g0485 573 PANTHER UNCHARACTERIZED 253 542 - -
Tpr4g0485 573 PANTHER UNCHARACTERIZED 7 218 - -
Tpr4g0485 573 Gene3D Ribonuclease Inhibitor 392 561 IPR032675 -
Tpr4g0485 573 PANTHER NODULIN-LIKE PROTEIN 253 542 - -
Tpr4g0485 573 PANTHER NODULIN-LIKE PROTEIN 7 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0485 Tpr-Chr4 4601500 4605254 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0485 K10268 - gmx:100819538 548.125