Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0478 ATGCGACGCGGTTCATCCAAAAAATCTGGTCAATCCAATCCCTCCGTCAATTCATCTGCCGCGGATCTCTTCCGTTCCGCTTCAAGTAAAGCAAACTCAAAGGAACTGGAGCGGATTGATAGTCTATTTTATACGTATGCCAATGGATCTTCTGGGTTGATTGATCCAGAAGGAATTGAAGCACTTTGTGCTGATATAGAGGTGGATCATACTGATTTGAGGATTTTGATGCTTGCGTGGAAAATGAAAGCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCTTAAAAGCACTAAGGGCCGATACAGTAAGTAAATTGAAGAAGGCACTTCCAGACCTAGAAAAGGAGGTCAGGAGACCGTCAAATTTTTCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACAGAGGAGAAGCAGAAAAGCATTGATATCGAGAGCATTTGTGAATTACTTACTCTTGTTTTAGGCTCAACATTTCCAACCCAAGTCAACTTATTTGTGGAATATTTGAAGAATCAAAATGATTACAAGGTCGTAAACATGGACCAGTGGATGGGATTTTTCCGGTTTTGCAACGAGATAAGTTTTCCGTCGCTTAGTGACTATGATCCTGAACTTGCGTGGCCCTTAGTTCTGGATAATTTTGTGGAGTGGTTGCGAGAAAAGCAAAAGTAA 690 0.4101 MRRGSSKKSGQSNPSVNSSAADLFRSASSKANSKELERIDSLFYTYANGSSGLIDPEGIEALCADIEVDHTDLRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLTLVLGSTFPTQVNLFVEYLKNQNDYKVVNMDQWMGFFRFCNEISFPSLSDYDPELAWPLVLDNFVEWLREKQK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0478 229 Gene3D - 32 122 - -
Tpr4g0478 229 Gene3D Cullin, PONY binding domain 124 229 IPR042460 -
Tpr4g0478 229 MobiDBLite consensus disorder prediction 7 21 - -
Tpr4g0478 229 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g0478 229 PANTHER RP42 RELATED 1 228 IPR014764 -
Tpr4g0478 229 Pfam Cullin binding 109 223 IPR005176 -
Tpr4g0478 229 ProSiteProfiles DCUN1 domain profile. 34 225 IPR005176 -
Tpr4g0478 229 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 228 - -
Tpr4g0478 229 SUPERFAMILY EF-hand 27 194 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0478 Tpr-Chr4 4546543 4551348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0478 K17824 - gmx:100776788 422.165