Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0477 ATGTTGTTTTGTGGAAAGGGTTCAAGAAACGGCGTCGTTTTGGGATCTGTGCCGGTGTACCTTAACGTGTACGATCTGACACAATTCAACGGTTACGCTTACTGGTTTGGTCTTGGAGTTTATCATTCCGGTGTTCAAGTTCATGATGTTGAATATGCATTTGGGGCACATGAGCATGCATCAACTGGAATATTTGAAGGAGAACCAAAGAAATGTGAAGGGTTCAGATATAGGAAAACAATATTAATTGGAAAAACAGATAAAGATATTGATGAAGTGAGAGATTTGATGATTGAACTTGCTGCTGAGTACAAAGGAAATGCTTACAATCTCATTACAAAAAATTGTAATCATTTTTGTAATGATGCTTGTCTTAGGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAGAATTGGTTTTATTTGCAATTGTGTTTTACCCGTGACATTGAATTCAACCAAAGTTAGACATCATCATAGAATAGAAGACAAACAATGTGAACATGTGAAACATTCAAAACAAACAACAAGTGAACAACCAAACAAGGTTACTATTTCAAATTCAACACCTTCAACAACATCATCACCGGCTTCAACTAGTTCTGGATTAAGAAGGGGAAGGAGTAGAACTAGACGTCGTCTTCCTCCCCCTTCACCATTGATTAATTGTTCCCCGTCATCTTGA 696 0.375 MLFCGKGSRNGVVLGSVPVYLNVYDLTQFNGYAYWFGLGVYHSGVQVHDVEYAFGAHEHASTGIFEGEPKKCEGFRYRKTILIGKTDKDIDEVRDLMIELAAEYKGNAYNLITKNCNHFCNDACLRLTGNSIPSWVNRLARIGFICNCVLPVTLNSTKVRHHHRIEDKQCEHVKHSKQTTSEQPNKVTISNSTPSTTSSPASTSSGLRRGRSRTRRRLPPPSPLINCSPSS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0477 231 MobiDBLite consensus disorder prediction 180 208 - -
Tpr4g0477 231 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Tpr4g0477 231 PANTHER DESUMOYLATING ISOPEPTIDASE 14 230 IPR008580 GO:0008233
Tpr4g0477 231 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Tpr4g0477 231 PANTHER F23A5.4 PROTEIN 14 230 - -
Tpr4g0477 231 MobiDBLite consensus disorder prediction 171 231 - -
Tpr4g0477 231 Gene3D PPPDE domains 15 172 IPR042266 -
Tpr4g0477 231 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0477 Tpr-Chr4 4539544 4543428 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0477 K22763 - gmx:100796813 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0477 4 4539544 4543428 Tpr4g0477 4 4539544 4543428 ECH