Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0419 ATGACGAAAGTAGAAGTGGTGTTTATCCCTTCTCCAGGTTTAGGACATCTAACATCCACCCTTGAGTTTGCTAAACTTCTCATCAACCGTGATAACCGTCTCAGTATAACCGTCTTGGTCATTAAGTTTCCAAACACCGGTGGTGAAACAATAAAAACCATTTCCTCCTCCTTCGACTCAGAAAATCTCCATGTCATCAACCTCCCTGATTGTGCTCATGTTTCCTCCACTTCTGATGTAGGTAACTCTGTGAACACTCTCATTGAAACCCAAAAATCCAACGTTAAAGAAGTTGTTTCCAACATCACTGCAAAAGGAAAACTAGCTGTCTTTGTTGTTGACATGTTTTGCACCACCATGATTGATGTTGCCAATGAATTTGGTGTCCCTTCCCTTGTCTACTTCACTTCCAGTGTTGCTTTCCTTGGTTTGATACTTCATCTTCATACACTTTTGGAAGACAACTCTGAAGCCCTTCGGTTGTCATTGAAGCAGGATGAATTGGACATCCCTTGTTTCGCTAACCCCGTTCCTACAAACACATTGCCAACTCTGGTGCTCCGCAAGGAATGGGAATCATCTTTTTTCAACTATGGTGGAGGGCTCAAGAAAGCCAATGGCATTATTGTGAATTCGTTTCACGAGCTAGAACCTCATGCGATTAACTCATTCTTGGAAGACCCGGGTCTACGTGGTTTACCGGTGTATCCGGTGGGACCTGTATTAAACCTTGAGACCAAGCCCAAGGAAACTGTTGACTCTGATAATATCATTAAGTGGCTTGATGATCAACCTCCTTCCTCGGTAGTTTTCATATGCTTTGGAAGCGTGGGTGCTTTCGATAAGGATCAGGTTAGGGAAATTGCGTGTGCCATTGAGAAATGTGGAACCCGCTTCTTGTGGTCTCTGAGGAAACCCCCACCAAACGGAACCATGGGTCCGGCGTCTGATTACCCTCTTTCTGATTTGGCTGCAGTTTTACCTGAAGGGTTCTTAGATCGAACTGCTGAGATTGGAAAGGTCATTGGATGGGCCCCTCAGGTCCAAGTACTCGCTCATCCAGCCACGGGAGGCTTTGTTTCGCATTGCGGTTGGAATTCTACACTCGAGAGCATACACTATGGTGTGCCTATTGCCACATGGCCACTCTTTGCTGATCAACAAACCAATGCTCTTGAACTTGTGTCAGAGCTTAAGATGGGTGTGGAGATTGCATTGGATTATAGGATGGAATACGATGTTGGGCGCGACTATCTTTTAACTGCTGACAAGATCGAGAAGGGAATAAGGAATGTGTTGGATAAGAATGGAGAGGTAAGGAAGAAAGTGAAAGATATAAGTGAACAAAGTAGGAAAACATCGTTAGAAGGTGGTTCTTCCTACACTTGCTTAGGTCGTTTGATTGATTATATTGTAAATCAAGTATGA 1428 0.4405 MTKVEVVFIPSPGLGHLTSTLEFAKLLINRDNRLSITVLVIKFPNTGGETIKTISSSFDSENLHVINLPDCAHVSSTSDVGNSVNTLIETQKSNVKEVVSNITAKGKLAVFVVDMFCTTMIDVANEFGVPSLVYFTSSVAFLGLILHLHTLLEDNSEALRLSLKQDELDIPCFANPVPTNTLPTLVLRKEWESSFFNYGGGLKKANGIIVNSFHELEPHAINSFLEDPGLRGLPVYPVGPVLNLETKPKETVDSDNIIKWLDDQPPSSVVFICFGSVGAFDKDQVREIACAIEKCGTRFLWSLRKPPPNGTMGPASDYPLSDLAAVLPEGFLDRTAEIGKVIGWAPQVQVLAHPATGGFVSHCGWNSTLESIHYGVPIATWPLFADQQTNALELVSELKMGVEIALDYRMEYDVGRDYLLTADKIEKGIRNVLDKNGEVRKKVKDISEQSRKTSLEGGSSYTCLGRLIDYIVNQV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0419 475 Gene3D Glycogen Phosphorylase B; 249 452 - -
Tpr4g0419 475 Gene3D Glycogen Phosphorylase B; 7 464 - -
Tpr4g0419 475 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Tpr4g0419 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 472 - -
Tpr4g0419 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 267 395 IPR002213 GO:0008194
Tpr4g0419 475 PANTHER UDP-GLYCOSYLTRANSFERASE 71B2 4 472 - -
Tpr4g0419 475 PANTHER GLYCOSYLTRANSFERASE 4 472 - -
Tpr4g0419 475 CDD GT1_Gtf-like 6 451 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0419 Tpr-Chr4 3988156 3990132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0419 3 475 Glycosyltransferase AT3G21760 44.196 3.39e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0419 - - mtr:MTR_5g090660 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0419 4 3988156 3990132 Tpr4g0419 4 3988156 3990132 ECH