Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0244 ATGAGCGGCGGTGGTGGCGGGTCTAGGGTTCCGATCCCCGACAATGTACGGAAAACCATTCAAGACATCAGAGAGATCACCGGAAAACAGCACACCGACGATGAAATCTACGCCGTCCTTAAAGAATGTTCAATGGATCCCAATGAAACTGCTCAAAAGCTTCTCTATTTAGATACTTTTCATGAGGTTAGAAGGAGACGCGACAAGAAGAAGGAGGGATTGAGCAGCAGGGTTTCTGAGGAGTCTAGATCAAACCAACGTGGACAGGGGAGGGGGGCAAGAGGTGCTTCAGGGGGCTATTCCTCAAACTTTCTTGATGGTGGTGGTGGGAGGAACCTTGCTATTCGAAGGGAAAATGGATTCCAACATACTGCAGAAAGAACTCGTGCTTCCTCTGCTCAGCCAGATTTACAGAAAAAAACTAATACAGGAGCTCAAGCCTTAAGTGATTCAGCTGTTGCACCCCATAGTGCTGCAAATCAATCCAATGGGAAGTCTGGTCATGGTTCTTCTGGCAAATCTCTCTTAGGTGTCCCTAAAAGCAGTTCAGCTGCTAATGACACTGTCAATAAAGAAAATTTTCTACCTCAAGCAGTTGCTGTTGCAGCAACCACTTCCCCTACTCAAACCTTTGCCTCAATTACAAGAACTGATCAAGGAAAATCTCTGTCAAGTTCTGATCAACGTCAAATTTCTGTATCTGGTGTTTATTCCTCTTCAGATCCTGTGCTGGCACCATCTATCACCCAGAATCCTGGTGTTGGCAGTGCTATCAGTAGGGAAGTAGGGAGTGACCGGATATCTGCTGGGCCGAATCATGTTAAAGGAAACAAACTTGAAGAAGCTAGTGATTTATCAGCATCCGAGAATGAGAAGTCCGGGTCAATGAATTCAACAAGCAATCTGAATGACATACAGAAGACAAATGAAGTTGAAGGTAACCAGTTATCCGAGCCCTTGCAACTCTCTTCATCATTGAATAGTTCTTTGAGGCCATCTTCCAGTTGTGTTAGCCAACCACCTCAAGATGTTTCTGAAACAGCCGATGTCACCGAGGTCTCAACGTCAGAAGTTCATGTGCAATCAACTGAATTGAGACAACATGTTACTTTTCCAAACCATTTCCAAGTGCCCGAGTCTTTGAAAGGTGGTCTTACATTTGGAAGCTTTGATACTTTCGGTCCAAGTGGAACATCTAGTAGTGTAACTGGTTGTGATGATAGCACTTCTCCCACTCCTGAATCTTCTCCAGGGAAAGATGAAGCTGTTACTTTGAGCAACCAAAGTGCGCCATTGACTGAACATGGAGGTCATCTTGATTATGCACATTCTTCATCTTTTCTAATTAATAAGACACTGGCTTCAGAAGGCATTTCTATAACTGGTAATGATTCAAAGATTGAGCAGCCAAAGCAGGAGGTACTGTTAACTCCCGAGGGCCATCCGATTCTGACTGTTCAAAGTGCTCAAAATTATGGTTTGAATTTCATGTCTACCATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGCTTCAGGCGCAAGAAACATCACACTTTCCTTCCTTTGTTACTGCAAGTTCTCAGACTGTGTCCCCGAGCCCAACTCCACCTCCACAGAGCTCTATACCTGTATCTCCACAGCCAGTTTCTTATTTTAGGCCACCATACCCAGCTAACTTCTTCCCATATGGCCCCTATTACCCCCCAATTTACGTGTCTCCGATGCATCAATTTTTAAGCCCCAATGGTTTCCCTCAACAGCCATCAACTGGCAACATATATCTACCAGCCGCGGCTGCAGCTGCTGGGATAAAATTCCCTCATCCGCAATTCAAGGCTGGAGCAAACACAGGAAATATGGCTCATATTGGAATTCCTTCTGGATCATATATCACTCCACCTGTTGGATATGCTCCTAATCCGACAGTGAATACTGGAAGCTCTGCCGGAACTGAAGATATTTCAGTGTCTCAGCTGAAGGAAAACCAAATTTATACAACTGGACAACTGAGTGAAGGCTCTGCTGTGTGGATACATGCACCAGGCCAAGATATATCCAGTTTGCAACTCAATTCTCTATATAACCTTACTCCTCAGGGCCAACATCTCAACTTCCCCCAGACCCAGGCTGCTCAAGGAGTATTTCCTGGTATCTATCAACCAGGGCAGACAGTAGCTTCACCTTCTACCCTTTTGCAGCAGTCTCAAGCTGTCGCTGGGTCTGTTGAAACTGTAGCCCCCCCTCCAGGATCTTATCAGCAGCCTGGACCTGCACAAATCAATTGGACTTCTAATTTTTAG 2307 0.4521 MSGGGGGSRVPIPDNVRKTIQDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDKKKEGLSSRVSEESRSNQRGQGRGARGASGGYSSNFLDGGGGRNLAIRRENGFQHTAERTRASSAQPDLQKKTNTGAQALSDSAVAPHSAANQSNGKSGHGSSGKSLLGVPKSSSAANDTVNKENFLPQAVAVAATTSPTQTFASITRTDQGKSLSSSDQRQISVSGVYSSSDPVLAPSITQNPGVGSAISREVGSDRISAGPNHVKGNKLEEASDLSASENEKSGSMNSTSNLNDIQKTNEVEGNQLSEPLQLSSSLNSSLRPSSSCVSQPPQDVSETADVTEVSTSEVHVQSTELRQHVTFPNHFQVPESLKGGLTFGSFDTFGPSGTSSSVTGCDDSTSPTPESSPGKDEAVTLSNQSAPLTEHGGHLDYAHSSSFLINKTLASEGISITGNDSKIEQPKQEVLLTPEGHPILTVQSAQNYGLNFMSTMLGTQQVQFEGSELQAQETSHFPSFVTASSQTVSPSPTPPPQSSIPVSPQPVSYFRPPYPANFFPYGPYYPPIYVSPMHQFLSPNGFPQQPSTGNIYLPAAAAAAGIKFPHPQFKAGANTGNMAHIGIPSGSYITPPVGYAPNPTVNTGSSAGTEDISVSQLKENQIYTTGQLSEGSAVWIHAPGQDISSLQLNSLYNLTPQGQHLNFPQTQAAQGVFPGIYQPGQTVASPSTLLQQSQAVAGSVETVAPPPGSYQQPGPAQINWTSNF* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0244 768 SUPERFAMILY UBA-like 12 73 IPR009060 GO:0005515
Tpr4g0244 768 Pfam GBF-interacting protein 1 N-terminal 12 72 IPR009719 -
Tpr4g0244 768 PANTHER FLOCCULATION PROTEIN (DUF1296) 3 768 IPR044277 -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 398 425 - -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 267 301 - -
Tpr4g0244 768 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 3 768 - -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 320 357 - -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 212 234 - -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 65 109 - -
Tpr4g0244 768 MobiDBLite consensus disorder prediction 150 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0244 Tpr-Chr4 2486232 2493724 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0244 - - gmx:100819602 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0244 4 2486232 2493724 Tpr4g0244 4 2486232 2493724 ECH