Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0242 ATGGCAGGAATTGTTGAAGATACAGCTTCCTCTGTTCATACTAAGGACCATGATGAATCCAAACTTGCCATTGATGATGATGACGACAAAGAAGTGAATGATTCTCCTATAGAGCAAGTCAGACTAACAGTACCAATAACAGATGATCCTACACAACCAGCACTTACATTTAGGACATGGACTATTGGTTTGGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGTGTTCAGAACAAACCCTCTAACTATCTCTTCTATCACAGCACAAATAGTTTCTCTCCCACTTGGGAAATTAATGGCTGCAACACTTCCAACCACAATATATAGAGTCCCTTTCACTCCTTGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTTATAACCATTTTTGCTACTTCTGGAGCTAGTGGTGTCTATGCCATTGACATAATTACTATTGTTAAGGCTTTTTACCACAGGAGTATCAATCCAGTTGCTGCTTTTTTGCTAGCACTGTCAACCCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGGTCCTTGTGGACTCACCCTATATGTGGTGGCCTGCAAATCTTGTCCAAGTGTCTCTATTCAGGGCATTTCATGAGAAAGAAAAGAGGCCTAAAGGAGGAAACACTCGGTTGCAATTCTTTTTTCTAGTCTTTGTGGCAAGCTTTGCTTATTACATTGTTCCAGGCTACTTTTTCCAAGCAATATCAACCATCTCTGTTGTTTGCTTAATATGGAAAAACTCTGTCACTGCTCAACAGATTGGTTCAGGAATGAGGGGTCTTGGTATTGGTTCATTTACCCTCGATTGGAACACTGTTGCTGGTTTCTTAGGAAGTCCTTTGGCATATCCTGGTTTTGCCATCATCAACATATTGGTTGGATTTGTGTTGTATATCTATGTTGTGATTCCCATTGCCTATTGGAACAATTTTTATGATGCCAAAAAGTTTCCCCTCATCCATTCTCACACATTTGATTCCACCGGTGCAATATATAATGTTTCTAGGATTCTTAATGATGCAACATTTGACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGATTATGGATTGAGCTTCGCAGCTCTAACTGCAACCGTCTCGCATGTTTTCCTCTTCCATGGAAAAACGGTTAATCAGATGTGGCGAAAGACAACAGCCACGCTAAAAGAGCAAGCCGGAGACGTGCATACAAGAATCATGAAGAAAAACTATGAACAAGTCCCTGAGTGGTGGTTCATAAGCATTTTGGTTCTTATAACTATTATGGCCTTGATATGCTGTGAAGGCTTTGGCAAGCAGCTCCAACTTCCTTGGTGGGGAGTCTTGCTTTCTCTAACAATTGCATTGTTTTTTACTTTGCCAGTTGGTGTCATTCAAGCAACGACAAATCAGCAAACTGGACTTAATGTGATCACAGAGTTGATCATTGGTTACATTTATCCTGGAAAGCCACTTGCTAATGTAGCCTTCAAGACTTATGGATATATCAGCATGTCACAAGCACTTGGTTTCCTTCAAGACTTCAAATTAGGCCACTACATGAAAATTCCACCAAAATCTATGTTCATAGTACAATTGGTAGGAACTTTGGTGGCTTCAAGTGTATACTTCGGCACAGCATGGTGGCTTCTAACAACTATTCCACACATATGTGATCCATCAAATTTGCCAGAGGGTAGTCCATGGACTTGTCCTGGTGATGATGTGTTTTACAATGCTTCAATCATATGGGGAATAGTAGGACCACAAAGGATGTTCACAAAGGATGGAATTTATCCTGGATTGAATTGGTTTTTCCTCATAGGTCTACTTGCGCCTGTTCCAGTGTGGCTGCTAGCTCGCAAATATCCGAATCACAAATGGATCGAACTGATCAACATGCCACTTATAATTGCAGGTGCAAGTCAAATACCACCGGTTAGATCAATAAATTTTATTTCATGGGGAGTTGTTGGAATCTTCTTCAATTTCTATATTTACAAACGTTTCAAGTCGTGGTGGGCTAGACACACTTACATTCTCTCGGCAGCTTTAGATTCTGGCATTGCTTTCATGGGTGTGTTGCTATATTTTTCACTTCAATCTTATGATATCAATGGCCCAGCATGGTGGGGGCTTGAAGGAGATGATCACTGTCCCTTGGCTATATGCCCTACAGCTCCTGGTGTTGTTACCGAGGGATGTCCTGCCTTCTTTTGA 2274 0.4063 MAGIVEDTASSVHTKDHDESKLAIDDDDDKEVNDSPIEQVRLTVPITDDPTQPALTFRTWTIGLGCCIILSFVNQFFVFRTNPLTISSITAQIVSLPLGKLMAATLPTTIYRVPFTPWSFTLNPGPFNLKEHALITIFATSGASGVYAIDIITIVKAFYHRSINPVAAFLLALSTQMLGYGWAGIFRKVLVDSPYMWWPANLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYIVPGYFFQAISTISVVCLIWKNSVTAQQIGSGMRGLGIGSFTLDWNTVAGFLGSPLAYPGFAIINILVGFVLYIYVVIPIAYWNNFYDAKKFPLIHSHTFDSTGAIYNVSRILNDATFDIDMDAYNNYSKLYLSITFAFDYGLSFAALTATVSHVFLFHGKTVNQMWRKTTATLKEQAGDVHTRIMKKNYEQVPEWWFISILVLITIMALICCEGFGKQLQLPWWGVLLSLTIALFFTLPVGVIQATTNQQTGLNVITELIIGYIYPGKPLANVAFKTYGYISMSQALGFLQDFKLGHYMKIPPKSMFIVQLVGTLVASSVYFGTAWWLLTTIPHICDPSNLPEGSPWTCPGDDVFYNASIIWGIVGPQRMFTKDGIYPGLNWFFLIGLLAPVPVWLLARKYPNHKWIELINMPLIIAGASQIPPVRSINFISWGVVGIFFNFYIYKRFKSWWARHTYILSAALDSGIAFMGVLLYFSLQSYDINGPAWWGLEGDDHCPLAICPTAPGVVTEGCPAFF* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0242 757 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 33 722 IPR004648 GO:0055085
Tpr4g0242 757 PANTHER ISP4 LIKE PROTEIN 20 754 IPR004648 GO:0055085
Tpr4g0242 757 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 39 718 IPR004813 GO:0035673
Tpr4g0242 757 MobiDBLite consensus disorder prediction 1 32 - -
Tpr4g0242 757 Pfam OPT oligopeptide transporter protein 55 717 IPR004813 GO:0035673
Tpr4g0242 757 MobiDBLite consensus disorder prediction 10 28 - -
Tpr4g0242 757 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 20 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0242 Tpr-Chr4 2473628 2477343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0242 14 756 Organic Solute Cotransporters AT5G55930 67.114 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0242 - - gmx:100776230 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0242 4 2473628 2477343 Tpr4g0242 4 2473628 2477343 ECH