Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0241 ATGACAGGGGTTGTCAGTGATACATTCCATATTGAAGATGACAACGATAAAGAAGTGGATGATTCTCCTATAGAGCAAGTCCGACTTACAGTGCCAATAACAGACGATCCTACACAACCAGCACTGACATTTAGGACATGGACTATTGGTTTGGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGGGTTCAGAACCAACCCTTTATTTATCTCTTCCATCGCAGCACAAATAGTTTCTCTCCCACTTGGGAAACTAATGGCTGCAACACTTCCAACCACAATATATAAAGTCTCTTTCACTCATTGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTTATAACTATTTTTGCTAGTGCTGGAGCTAGTGGTGTCTATGCCATTAACATAATCACTATTGTTAAGGCTTTCTACCACAGGAATATCAATCCAACTGCTGCTTTTTTGCTAGCACTGTCAACCCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGGTCCTTGTGGACTCACCCTACATGTGGTGGCCTGCAAATCTTGTTCAGGTGTCCCTATTCAGGGCATTTCATGAAAAAGAAAAGAGGCCTAAAGGAGGAAACACAAGGTTGCAATTCTTTTTCCTGGTCTTTGTAGCTAGCTTTGCTTATTACATTATTCCAGGCTACTTTTTCCAAGCAATATCAACCATCTCTGTTGTTTGCTTAATATGGAAAAACTCTGTCACGGCTCAACAGATTGGTTCAGGAATGAGGGGTCTTGGTATTGGTTCATTTACACTCGATTGGAACACTGTTGCTGGTTTCTTAGGAAGTCCTTTGGCTTATCCTGGTTTTGCCATCATCAACATGTTGGTTGGATTTGTGTTGTATATCTATGTTGTGATTCCCATTTCCTATTGGAGCAATTTTTATGACGCCAAAAAGTTTCCCCTCATCAGTTCTCACACATTTGATTCCACTGGTACACCATATAATGTTTCTAGGATTCTTAATGATGCAACCTTTGACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGATTATGGATTGTGCTTCGCAACTCTCACAGCCACCATCTCTCATGTTTTCCTCTTCCACGGAAAAACGATTAATCAGATGTGGAGAAAGACAACAGATGCACTAAAAGAACAAGCTGGAGACGTACATACAAGAATCATGAAGAGAAACTATGAACAAGTCCCTGTGTGGTGGTCCATAACCATTTTGTTTCTTATGACTATTATGGCCTTGATATGTTGCGAAGGCTTTGACAAGCAGCTCCAGCTTCCATGGTGGGGGGTCTTGCTTTCTCTAACAATTGCATTGGTTTTCACTTTGCCAATTGGTGTCATTCAAGCAACAACAAACCAGCAAGCTGGACTGAATGTGATCACAGAGTTGATTATTGGGTACCTGTATCCTGGAAAGCCCCTTGCTAATGTAGCCTTCAAGACTTATGGATACATCAGCATGTCACAAGCACTTGGTTTCCTTCAAGACTTCAAATTAGGTCACTACATGAAAATTCCTCCTAAATCTATGTTCATAGTACAATTGGTAGCAACTTTGGTTTCTTCAAGTGTATACTTCATGACAGCATGGTGGCTTCTAACAACTATTCCAAACATATGTGATGAATCAATGTTGCCAGAGGGTAGTCCATGGACTTGTCCTGGTGATGATGTGTTTTACAATGCTTCAATTATATGGGGAATAGTAGGTCCAAAACGGATGTTCACCGAGGATGGAATTTACCCCGGAATGAATTGGTTTTTCCTCATAGGTCTACTTGCGCCTGTTCCAGTGTGGCTGCTAGCTCGCAAATATCCCAATCACAAATGGATTGAACTCATCAACATGCCACTTATAATTGCTGCTGCCAGTGGAATACCACCGGTTAGATCAATAAATTATATTTCATGGGGAGTTGTTGGAATCTTCTTCAATTTCTATGTTTACAAACGTTTCAAGTCATGGTGGGCTAGACACACTTACATTCTCTCGGCAGCTTTGGATTCTGGCATTGCTTTCATGGGTGTGTTGCTCTATTTTTCACTTCAAACTTATAATATCTTTGGTCCAACATGGTGGGGTCTTGAAGGAGATGATCACTGTCCCTTGGCTAAATGCCCTACAGCTCCTGGTATTGTTACCAAGGGATGTCCTATCTTTTGA 2232 0.4073 MTGVVSDTFHIEDDNDKEVDDSPIEQVRLTVPITDDPTQPALTFRTWTIGLGCCIILSFVNQFFGFRTNPLFISSIAAQIVSLPLGKLMAATLPTTIYKVSFTHWSFTLNPGPFNLKEHALITIFASAGASGVYAINIITIVKAFYHRNINPTAAFLLALSTQMLGYGWAGIFRKVLVDSPYMWWPANLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYIIPGYFFQAISTISVVCLIWKNSVTAQQIGSGMRGLGIGSFTLDWNTVAGFLGSPLAYPGFAIINMLVGFVLYIYVVIPISYWSNFYDAKKFPLISSHTFDSTGTPYNVSRILNDATFDIDMDAYNNYSKLYLSITFAFDYGLCFATLTATISHVFLFHGKTINQMWRKTTDALKEQAGDVHTRIMKRNYEQVPVWWSITILFLMTIMALICCEGFDKQLQLPWWGVLLSLTIALVFTLPIGVIQATTNQQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMSQALGFLQDFKLGHYMKIPPKSMFIVQLVATLVSSSVYFMTAWWLLTTIPNICDESMLPEGSPWTCPGDDVFYNASIIWGIVGPKRMFTEDGIYPGMNWFFLIGLLAPVPVWLLARKYPNHKWIELINMPLIIAAASGIPPVRSINYISWGVVGIFFNFYVYKRFKSWWARHTYILSAALDSGIAFMGVLLYFSLQTYNIFGPTWWGLEGDDHCPLAKCPTAPGIVTKGCPIF* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0241 743 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 20 708 IPR004648 GO:0055085
Tpr4g0241 743 Pfam OPT oligopeptide transporter protein 42 704 IPR004813 GO:0035673
Tpr4g0241 743 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 26 706 IPR004813 GO:0035673
Tpr4g0241 743 PANTHER ISP4 LIKE PROTEIN 8 742 IPR004648 GO:0055085
Tpr4g0241 743 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 8 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0241 Tpr-Chr4 2440909 2446731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0241 1 743 Organic Solute Cotransporters AT5G55930 66.093 0.0 1044
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0241 - - gmx:100776230 1317.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0241 4 2440909 2446731 Tpr4g0241 4 2440909 2446731 ECH