Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0239 ATGGCAGGGGTTGTCCAAGATACATTCCATATTCAAACTAAGGAGGACCATGAATCTAAACTTGCCATTGCAGAGGAGGACGACAAAGAAGTGGATGATTCTCCTATAGAGCAAGTCAGACTAACAGTGCCAATAACAGACGATCCTACACAACCGGTACTGACGTTTAGGACATGGACTATTGGTTTGGGATGTTGCATTATCCTTTCCTTTGTGAACCAATTCTTTGGGTTCAGAACAAACCCTCTGTCTATCTCTTCTATTGCAGCACAAATCGTTTCTCTCCCACTTGGGAAAGTAATGGCTGCAACACTTCCAACCACAATATATAAAGTCCCTTTAACTCCTTGGTCTTTCACATTGAATCCTGGACCATTCAATTTGAAGGAACATGCCCTTATAACCATCTTTGCTAGTGCTGGATCTAGTAGTGTTTATGCCATTAACATAATCACTATTGTTAAGGCTTTCTACCACAGGAGTATCAATCCAACTGCTGCTTTTTTGTTAGCACTGTCAACCCAGATGCTTGGTTATGGATGGGCTGGTATATTCAGAAAGGTCCTTGTGGACTCACCCTACATGTGGTGGCCTTCAAATCTTGTTCAAGTGTCTCTATTCAGGGCGTTTCATGAAAAAGAAAAGAGGCCTAAAGGAGGAAACACTAGGTTGCAATTCTTTTTTCTGGTCTTTGTGGCTAGCTTTGCTTATTACATTATTCCAGGCTACCTTTTCCAAGCAATATCAACCATCTCTGTTGTTTGCTTAATATGGAAAAACTCTGTCACTGCTCAACAAATTGGTTCAGGAATGAGGGGTCTTGGTATTGGTTCAGTTACCCTCGATTGGAACACTGTTGCTGGTTTCTTAGGAAGTCCTATGGCTTATCCTGGTTTTGCCATTATCAACATATTGGCTGGATTTGTGTTATTTATCTATGTTGTGATTCCAGTTTCCTATTGGAGCAATATTTATGATGCCAAAAAGTTTCCCCTCATCAGTTCTCACACATTTGATTCCACTGGTAAAACATATAATGTTTCTAGGATTCTTAATGACGCAACATTTGACATTGATATGGATGCTTATAACAATTACAGTAAGCTCTATCTTAGTATCACATTTGCATTTGATTATGGATTGAGCTTCGCAACTCTCACTGCCACCGTCTCACATGTTTTCCTCTTCCATGGAAAAACGATTAATCAGATGTGGAGAAAGACAACAGCTGCGCTAAAAGAACAGGCTGGAGACGTGCATACAAGAATCATGAAGAGAAACTATAAACAAGTTCCGGAGTGGTGGTTCGTAAGCATATTATTTCTTATGACTATTATGGCCTTGCTATGTTGCGAAGGCTTTGGCAAGCAGCTCCAACTTCCATGGTGGGGAGTCTTGCTTTCTCTAACAATTGCGTTGGTTTTCACTTTGCCAATTGGTGTCATTCAAGCAACAACAAACCAGCAAGCTGGACTAAATGTGATCACAGAGTTGATTATTGGTTACCTTTATCCTGGAAAGCCTCTTGCTAATGTAGCCTTCAAGACTTATGGATACATTAGTATGGCACAAGCACTTAGTTTCCTCCAAGACTTCAAATTAGGCCACTACATGAAAATTCCTCCGAAATCTATGTTCCTAGTACAGTTGGTGGGAACTTTGGTTGCTTCAAGTGTACAGTTTATCACAGCATGGTGGCTTCTAACAACTATTCCAAACATATGTGATGAATCAATGTTGCCAGAGGGTAGTCCATGGACTTGTCCTGGAGATGATGTGTTTTACAATGCTTCAATTATATGGGGAATAGTAGGACCAAAACGGATGTTCACAAAGGATGGAATTTACCCCGGAATGAATTGGTTTTTCCTCATTGGTCTACTTGCGCCTGTTCCAGTATGGCTGCTAGCTCGCAAATATCCGAATCACAAATGGATTGAACTCATCAACATGCCACTTATAATTGCAGGTGCCAATGGAATACCACCCGTTAGATCAATAAATTTTATTTCATGGGGAGTTGTTGGAATCTTCTTCAATTTCTATGTTTACAAACATTTCAAGTCATGGTGGGCTCGACACACTTACATTCTCTCGGCAGCTTTGGATTCTGGCATTGCTTTCATGGGTGTGTTGCTCTATTTTTCACTTCAAACATATAATATCTTTGGTCCAACATGGTGGGGTCTTGAAGGAGATGATCACTGTCCCTTGGCTAAATGCCCTACAGCTCCTGGTATTGTTACCAAGGGATGTCCTGTCTTTTGA 2268 0.4074 MAGVVQDTFHIQTKEDHESKLAIAEEDDKEVDDSPIEQVRLTVPITDDPTQPVLTFRTWTIGLGCCIILSFVNQFFGFRTNPLSISSIAAQIVSLPLGKVMAATLPTTIYKVPLTPWSFTLNPGPFNLKEHALITIFASAGSSSVYAINIITIVKAFYHRSINPTAAFLLALSTQMLGYGWAGIFRKVLVDSPYMWWPSNLVQVSLFRAFHEKEKRPKGGNTRLQFFFLVFVASFAYYIIPGYLFQAISTISVVCLIWKNSVTAQQIGSGMRGLGIGSVTLDWNTVAGFLGSPMAYPGFAIINILAGFVLFIYVVIPVSYWSNIYDAKKFPLISSHTFDSTGKTYNVSRILNDATFDIDMDAYNNYSKLYLSITFAFDYGLSFATLTATVSHVFLFHGKTINQMWRKTTAALKEQAGDVHTRIMKRNYKQVPEWWFVSILFLMTIMALLCCEGFGKQLQLPWWGVLLSLTIALVFTLPIGVIQATTNQQAGLNVITELIIGYLYPGKPLANVAFKTYGYISMAQALSFLQDFKLGHYMKIPPKSMFLVQLVGTLVASSVQFITAWWLLTTIPNICDESMLPEGSPWTCPGDDVFYNASIIWGIVGPKRMFTKDGIYPGMNWFFLIGLLAPVPVWLLARKYPNHKWIELINMPLIIAGANGIPPVRSINFISWGVVGIFFNFYVYKHFKSWWARHTYILSAALDSGIAFMGVLLYFSLQTYNIFGPTWWGLEGDDHCPLAKCPTAPGIVTKGCPVF* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0239 755 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 32 720 IPR004648 GO:0055085
Tpr4g0239 755 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 19 754 - -
Tpr4g0239 755 PANTHER ISP4 LIKE PROTEIN 19 754 IPR004648 GO:0055085
Tpr4g0239 755 Pfam OPT oligopeptide transporter protein 54 716 IPR004813 GO:0035673
Tpr4g0239 755 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 38 718 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0239 Tpr-Chr4 2417494 2430471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0239 8 755 Organic Solute Cotransporters AT4G26590 66.000 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0239 - - gmx:100776230 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0239 4 2417494 2430471 Tpr4g0239 4 2417494 2430471 ECH