Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0218 ATGGGTGAGGAAGAACCGGTTAATACAGTTTCCAAGACTGACTCAAATGGCAATAGCACTCTGGAGAAAACTTTAGATGACACGAATGAAAAGAAGGACTGCGAACCTAAGGGAGGAAAATCCTTGGAGAATAATGCAGTCAAAGACTTGAAGGAGGATGGTATAAAAGAAATGGAAGTTGATAAGAAAGCTGATGGGGAGGAAGAACTAGAAATGAAAGAGGATAAGAAAGTTGATGATGGTAAGGTTATAAAAGACGATAACAAAGTTGGCGACGTGGAAGAATTAAAAGACAGTAAGAAAGTTGATGAAGGGGGGAAATTAAAAGAGGCTGGGAAAGAAGTTGACATGAAAGAATCAGACGATGATAAGATAGATGATTTTGTGAATGAAATGGAAGAAAATAAGAAAGATGATAACGGGTTTGAGAAGGTTAATGAGAAGTCAAATGAAGAAGATATCAAAGTTGAGAAACGATTGAAAAAATGTGTGAGAGGAAAGACTATTGAAGAGAAAAGTCAAGAAGGGGGGGAGGATGATAAGGTTGACGATAAGTCAAATGAAGAAGATAAAGATGATACTAAAATTGTGAAACTATCGAAAAAGAGTGGGAGAGGAAAGGTCGATGTGGAGAAGATGAAAAAGAAAATAAAGGAACAGAAGGAGACAAAGGGTATCCCTGAAGGCAAAAATGAGAGCAGTGAAAATGATGAAAGGCAAGAAGGGGAGGAGGATGGTAAGGATAAGGTTGACAATAAGTCAAATGAAGATGGCGCTGAAGATGTTGAAGTTGAGAAAGGATTAAAAAAGCGCGGGAGAGGAAACATCGATGCGGGGCAGGCGAAAAATGAAATAAAGGAACTGAAGGAGACAGAGCCAAGGACTCCTACGACAACCAACCGTCCTGTACGTGAAAGGAAATCTGTTAAGAGGTTGATAGAATCAGAGGAGACAGATGCATCCAAAGAATTTCACATTGAAAAGGGTCGTGGTACACCTTTAAAAGATATCCCTAATGTGGCATTTAAATTATCTAAAAGGACGGTTGATGATAATTTAAAATTACTCCATACAATCCTCTTTAGTAGGAGAGGAAAGGCCACCGAGATTAAGAATAATATATCAAGTTTTTCTGGTTTTGTATGGCATGAAAATGAGGAAAATCAAATGATTAAACTAAAAGAAAAATTTGACAAGTGTAATAAAGAGAACTTGATGGAATTCTGCGACGTGCTTGACATGCCAGTTACGAACGCAAATACAAGGAAGGAAGATATTATTGCAAAGCTAATAGACTATCTGGTTGCTCCTAAAGCCACTAAAACTGTGTTACTTGCAGAACAAGAAAAGTCCACTAAAGGGAAAAAGCGCATAGCAAAATCTGAAGAAAAATCTGAAACAGCAACGCCACGTTCTGCTAAGAGCCGGAAGAAAAATGAAGATTTTTCAGTAGCAGAGAAGAGAATTACCTCAACTGACACGGAAAGTGAGTCTGTGAAAGAAGATAAAGTTGAAGAGAAAAATAAAAACAATGTTCCTGACAATTCCGAAGATGAAAAGTCGATTCAAGAAAAAAAGCGCAAGCGCATAGCAAAACAAGATTCATCGGAAACTGGAACAGCAAGATCAAGACGTTCGGTTAAGAGTCAGAAGAAAAATGGAGATTCTGAAGTAGCAGCGGTGAGAAAGAGATCAACTGACGCAGAAAATGAGGCTGAGGAAGAACAGAAAGATGAAAAAAATGAAGCGGAAAATGGAAAAGTTCCTGACAAATCCAAGGATGAAAAGCCTGTAAAATCTGAAAGTGAGGATAAAAATGATTCTGATAAGGAATCTGAAGATGTGAAGAAAGTGAGTAAAACAACTAGAACATCTTCAAGACAGAAAGAAGCTGCTGCAAAAAGTAAAGCAAAGCAAATAACAGTTACAACAAAACCTTGCGCAGCACGTAAGAGAACTTCTAAGAAACCATTGTCTACACACTCCGAGTCTGATCATGATGATAGTGAGGAAAGTCCAAAGGTCTTTTCAAGGAGGAAGAAAAATGTAAAACAAGGAAAGCAGAAGAGCTCGAGTCTCACCAAGTCTTCCTCCGAAGACAAAACAGAAAAGGTTACTGAAAGAAAGGACAAGAGCAAAGAGGAGTCAGACCCCAGCGATGATCAGCTACGGAAGGGAATATGTGATATTTTCAAAGTTGTTGACTTCAATACGGCTACATTTAAGGATACTGTGGAGCTACTCGGTAAGCGATTCAACGTGGATCTCACACCAAGAAAGGCGTCTATAAAGACTATTATTCAGGAAGAGCTAACAAAACTAGTTGCAGAAGATATGGAAAAAGAAGAAAGGGGTGAGGAGGTTGAAGATATGTTGAAGAAGCCTAACTGA 2391 0.3848 MGEEEPVNTVSKTDSNGNSTLEKTLDDTNEKKDCEPKGGKSLENNAVKDLKEDGIKEMEVDKKADGEEELEMKEDKKVDDGKVIKDDNKVGDVEELKDSKKVDEGGKLKEAGKEVDMKESDDDKIDDFVNEMEENKKDDNGFEKVNEKSNEEDIKVEKRLKKCVRGKTIEEKSQEGGEDDKVDDKSNEEDKDDTKIVKLSKKSGRGKVDVEKMKKKIKEQKETKGIPEGKNESSENDERQEGEEDGKDKVDNKSNEDGAEDVEVEKGLKKRGRGNIDAGQAKNEIKELKETEPRTPTTTNRPVRERKSVKRLIESEETDASKEFHIEKGRGTPLKDIPNVAFKLSKRTVDDNLKLLHTILFSRRGKATEIKNNISSFSGFVWHENEENQMIKLKEKFDKCNKENLMEFCDVLDMPVTNANTRKEDIIAKLIDYLVAPKATKTVLLAEQEKSTKGKKRIAKSEEKSETATPRSAKSRKKNEDFSVAEKRITSTDTESESVKEDKVEEKNKNNVPDNSEDEKSIQEKKRKRIAKQDSSETGTARSRRSVKSQKKNGDSEVAAVRKRSTDAENEAEEEQKDEKNEAENGKVPDKSKDEKPVKSESEDKNDSDKESEDVKKVSKTTRTSSRQKEAAAKSKAKQITVTTKPCAARKRTSKKPLSTHSESDHDDSEESPKVFSRRKKNVKQGKQKSSSLTKSSSEDKTEKVTERKDKSKEESDPSDDQLRKGICDIFKVVDFNTATFKDTVELLGKRFNVDLTPRKASIKTIIQEELTKLVAEDMEKEERGEEVEDMLKKPN* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0218 796 Coils Coil 383 403 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 1 79 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 447 722 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 579 634 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 8 23 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 548 571 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 95 306 - -
Tpr4g0218 796 PANTHER DEK PROTEIN 517 786 IPR044198 GO:0003677|GO:0006325
Tpr4g0218 796 PANTHER DEK PROTEIN 230 521 IPR044198 GO:0003677|GO:0006325
Tpr4g0218 796 SUPERFAMILY DEK C-terminal domain 713 771 - -
Tpr4g0218 796 Pfam DEK C terminal domain 718 771 IPR014876 -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 187 306 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 694 722 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 24 79 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 656 678 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 95 181 - -
Tpr4g0218 796 MobiDBLite consensus disorder prediction 448 541 - -
Tpr4g0218 796 Gene3D - 708 773 - -
Tpr4g0218 796 Coils Coil 558 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0218 Tpr-Chr4 2288012 2294091 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0218 K17046 - gmx:100817467 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0218 4 2288012 2294091 Tpr4g0218 4 2288012 2294091 ECH